G1972252


Basic Information

Item Value
gene id G1972252
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 30695233 ~ 30696314 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2254670
attttttctgattcatcaaagtagccaccctttgccttgatgacagctttgcacactcttggcattctctcaaccagcttcacctggaatgcttttccaacagtcttgaaggagttcctacatatgctgggcacttgttggctgcttgtccttctctctgcggtccaactcatcccaaaccatctcaattgggttgaggtcgggtgattgtggaggccaggtcatctgatgcagcactccatcactctccttcttggtcaaatagcccttacacagcctggaggtgtgttgtgtcattgtcctgttgaaaaacaaatgatggtcccactaagtgttaaccagatgagatggcattttgctgcagaatactgtggtagccatgctggttaagtgtgccttgaattctaaataaatcactgacagtgtcaccagttatgcacccccacaccatcacacctcctcttccatgcttcacagtggaaaACCACACATGCGGCGATCATCTGTTCAgcaactctgcgtctcacaacgacacggcggttggaacaaaaaatctcaaatttggactcatcagaccaaaggacagatttccatttctataatgtccattgctcgtgtttcttggcccaagcaaatctcttcttattattggtgtcctttactagtggtttctttgcagcaattcgaccatgaaggcctgtttcacacagtctccactgaacagttgatgttgatgttgagatgtgtctgttacttgaactctgaagcatttatttgggatgcaatttctgaggctggtaactctaatgaacgtatcctctgcagcagaggtaactctgggtcttcctttcctgtggtggtcatcatgagagccagtttcatcaaagcacatgatggtttttgcgactgcacttaaagaaactttcaaagttcttgaaatgttccgtattgactgaccttcatgtcttaaagtaagtatggactgttgtttttctttgcttatttaagctgttcttgccataatatggaccaaatagggctatcttctgtatacccccctaccttcacaacacaactgattg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2254670 True 1082 TUCP 0.44 1 30695233 30696314

Neighbor

gene id symbol gene type direction distance location
LOC110505775 LOC106611224 coding upstream 364498 30092455 ~ 30330735 (+)
LOC110505773 LOC106611209 coding upstream 617939 30007361 ~ 30077294 (+)
LOC110505772 NA coding upstream 754063 29940079 ~ 29941170 (+)
LOC110505767 LOC106611206 coding upstream 788833 29888717 ~ 29906400 (+)
LOC110505766 LOC106611201 coding upstream 808874 29859648 ~ 29886359 (+)
LOC110505785 LOC106611232 coding downstream 295985 30992299 ~ 31000393 (+)
LOC110505784 LOC106611231 coding downstream 304202 31000516 ~ 31040820 (+)
LOC118944303 LOC106611235 coding downstream 384365 31080679 ~ 31082541 (+)
LOC110505788 LOC106611236 coding downstream 406970 31103284 ~ 31109026 (+)
LOC110505789 LOC106611239 coding downstream 518509 31214823 ~ 31220599 (+)
G1972249 NA non-coding upstream 4431 30690518 ~ 30690802 (+)
G1972236 NA non-coding upstream 81256 30613660 ~ 30613977 (+)
G1972230 NA non-coding upstream 86587 30607840 ~ 30608646 (+)
G1972227 NA non-coding upstream 89881 30605111 ~ 30605352 (+)
G1972215 NA non-coding upstream 107521 30587414 ~ 30587712 (+)
G1972266 NA non-coding downstream 16280 30712594 ~ 30712849 (+)
G1972270 NA non-coding downstream 27388 30723702 ~ 30723990 (+)
G1972272 NA non-coding downstream 28466 30724780 ~ 30724981 (+)
G1972287 NA non-coding downstream 57018 30753332 ~ 30753610 (+)
G1972294 NA non-coding downstream 64416 30760730 ~ 30760992 (+)
G1972245 NA other upstream 15238 30659404 ~ 30679995 (+)
G1972244 NA other upstream 40194 30637054 ~ 30655039 (+)
G1972242 NA other upstream 62566 30630328 ~ 30632667 (+)
G1971104 NA other upstream 1216850 29474120 ~ 29478383 (+)
G1973126 NA other downstream 461204 31157518 ~ 31157736 (+)
G1973193 NA other downstream 507301 31203615 ~ 31203991 (+)
G1973369 NA other downstream 691164 31387478 ~ 31387736 (+)
G1973635 NA other downstream 1022210 31718524 ~ 31718968 (+)
G1973669 NA other downstream 1090931 31787245 ~ 31789449 (+)

Expression


Co-expression Network