G1972309


Basic Information

Item Value
gene id G1972309
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 30795939 ~ 30796570 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2254735
GTACCTGTTCATTTTCTTCTAATAGGGTAAAAGTCAGAATACAGTACCTGTTCATTTTCTTCTAATAGGGTAAAAGTCAGAATACAGTACCTGTTCATTTTCTTCTAATAGGGTAAAAGTCAGAATACAGTACCTGTTCATTTTCTTCTAATAGGGTAAAAGTCAGAATACAGTACCTGTTCATTTTCTTCTAATAGGGTAAAAGTCAGAATACAGTACCTGTTCATTTTCTTCTAACAGGGTAAAAGTCAGAATACAGTACCTGTTCATTTTCTTCTAACAGGGGAAAAGTCAGAATACAGTACCTGTTCATTTTCTTCTAACAGGGTAAAAGTCAGAATACAGTACCTGTTCATTTTCTTCTTGCAGGGGAAAAGTCATAAGTTACTTGCAATTGAGAAAGTACCTATCAGTCCATCAGATAGATTCTCTGTCAAAGCATCAGTGTGGATGGTAATGAACTAGGCATCGTAAATAAAGGCCTACCCGGCTCCCTTGATCGCTAAGGCAAATGTTTTTTAATCATCTGATGTGTTCATTTATCCCAGGGCTTTAGCCTTAAATTACACCTCTTGCTAATACAtaactt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2254735 True 589 lncRNA 0.36 2 30795939 30796570

Neighbor

gene id symbol gene type direction distance location
LOC110505775 LOC106611224 coding upstream 465204 30092455 ~ 30330735 (+)
LOC110505773 LOC106611209 coding upstream 718645 30007361 ~ 30077294 (+)
LOC110505772 NA coding upstream 854769 29940079 ~ 29941170 (+)
LOC110505767 LOC106611206 coding upstream 889539 29888717 ~ 29906400 (+)
LOC110505766 LOC106611201 coding upstream 909580 29859648 ~ 29886359 (+)
LOC110505785 LOC106611232 coding downstream 195729 30992299 ~ 31000393 (+)
LOC110505784 LOC106611231 coding downstream 203946 31000516 ~ 31040820 (+)
LOC118944303 LOC106611235 coding downstream 284109 31080679 ~ 31082541 (+)
LOC110505788 LOC106611236 coding downstream 306714 31103284 ~ 31109026 (+)
LOC110505789 LOC106611239 coding downstream 418253 31214823 ~ 31220599 (+)
G1972297 NA non-coding upstream 31253 30764393 ~ 30764686 (+)
G1972294 NA non-coding upstream 34947 30760730 ~ 30760992 (+)
G1972287 NA non-coding upstream 42329 30753332 ~ 30753610 (+)
G1972272 NA non-coding upstream 70958 30724780 ~ 30724981 (+)
G1972270 NA non-coding upstream 71949 30723702 ~ 30723990 (+)
G1972318 NA non-coding downstream 8840 30805410 ~ 30805620 (+)
G1972321 NA non-coding downstream 12441 30809011 ~ 30809233 (+)
G1972332 NA non-coding downstream 20700 30817270 ~ 30817504 (+)
G1972339 NA non-coding downstream 28655 30825225 ~ 30825443 (+)
G1972341 NA non-coding downstream 30834 30827404 ~ 30827914 (+)
G1972252 NA other upstream 99625 30695233 ~ 30696314 (+)
G1972245 NA other upstream 115944 30659404 ~ 30679995 (+)
G1972244 NA other upstream 140900 30637054 ~ 30655039 (+)
G1972242 NA other upstream 163272 30630328 ~ 30632667 (+)
G1973126 NA other downstream 360948 31157518 ~ 31157736 (+)
G1973193 NA other downstream 407045 31203615 ~ 31203991 (+)
G1973369 NA other downstream 590908 31387478 ~ 31387736 (+)
G1973635 NA other downstream 921954 31718524 ~ 31718968 (+)
G1973669 NA other downstream 990675 31787245 ~ 31789449 (+)

Expression


Co-expression Network