G1972969


Basic Information

Item Value
gene id G1972969
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31043891 ~ 31044178 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2255525
ccacaatggattagtccactcagacaggtgcCAATCACACCATGATTTTAAGCAAAAATCTATATCTTTTGCTACTACTCAACTAAAGAAATCTCAGTCGACCAACAACCtaacgaccaaacaatcgaccagtcgactaaatggggtcagcactaaaagaaacaccaacataaagtgtcttaatagggcgttgggccaccacgagccgccagaacagcttcaatgcaccttggcatagattatccaagtgtctggaactcttttGGAGGAATGCGACACCATTGACCC

Function

NR:

description
PREDICTED: kinase suppressor of Ras 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2255525 True 288 lncRNA 0.44 1 31043891 31044178

Neighbor

gene id symbol gene type direction distance location
LOC110505784 LOC106611231 coding upstream 3071 31000516 ~ 31040820 (+)
LOC110505785 LOC106611232 coding upstream 43498 30992299 ~ 31000393 (+)
LOC110505776 LOC106611225 coding upstream 197212 30336535 ~ 30846679 (+)
LOC110505775 LOC106611224 coding upstream 713156 30092455 ~ 30330735 (+)
LOC110505773 LOC106611209 coding upstream 966597 30007361 ~ 30077294 (+)
LOC118944303 LOC106611235 coding downstream 36501 31080679 ~ 31082541 (+)
LOC110505788 LOC106611236 coding downstream 59106 31103284 ~ 31109026 (+)
LOC110505789 LOC106611239 coding downstream 170645 31214823 ~ 31220599 (+)
LOC110505790 LOC106611238 coding downstream 177314 31221492 ~ 31271457 (+)
LOC110505794 NA coding downstream 230490 31274668 ~ 31282108 (+)
G1972965 NA non-coding upstream 1185 31042457 ~ 31042706 (+)
G1972408 LOC106611229 non-coding upstream 70826 30972171 ~ 30973065 (+)
G1972392 LOC106611229 non-coding upstream 127779 30915738 ~ 30916112 (+)
G1972350 NA non-coding upstream 193906 30847889 ~ 30849985 (+)
G1972341 NA non-coding upstream 215977 30827404 ~ 30827914 (+)
G1972970 NA non-coding downstream 191 31044369 ~ 31044625 (+)
G1972985 NA non-coding downstream 11335 31055513 ~ 31055926 (+)
G1973107 NA non-coding downstream 105189 31149367 ~ 31149567 (+)
G1973118 NA non-coding downstream 109409 31153587 ~ 31153859 (+)
G1973140 NA non-coding downstream 121535 31165713 ~ 31165945 (+)
G1972252 NA other upstream 347577 30695233 ~ 30696314 (+)
G1972245 NA other upstream 363896 30659404 ~ 30679995 (+)
G1972244 NA other upstream 388852 30637054 ~ 30655039 (+)
G1972242 NA other upstream 411224 30630328 ~ 30632667 (+)
G1973126 NA other downstream 113340 31157518 ~ 31157736 (+)
G1973193 NA other downstream 159437 31203615 ~ 31203991 (+)
G1973369 NA other downstream 343300 31387478 ~ 31387736 (+)
G1973635 NA other downstream 674346 31718524 ~ 31718968 (+)
G1973669 NA other downstream 743067 31787245 ~ 31789449 (+)

Expression


Co-expression Network