G1972985


Basic Information

Item Value
gene id G1972985
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31055513 ~ 31055926 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2255541
gggctgAGCTTAGGTGGCGTACCCGAGTGCTGAGAGAGTaccgctcctatcccagccttggacgtgtccacctccactatgaacgccaaagagggatccggatgggccaacacgggagccgaggtaaacagagccctcaggtgactaaaagccctgtccgcctcagctgaccactgcaagcgcaccgggccccccttcagcagtgagataatgggagctgccacctgaccaaacgcctggataaacctccggtagtagttggaaaaccctaagaaccgctgcacctcctttaccgtggtgggagtcggccaattacacacggctgcaatgcggtcactcttCATCGCcaaggcatttctcagccttgacgtacaggtcatgctccaacaggcgaccaagcactctgcgcaccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2255541 True 414 lncRNA 0.58 1 31055513 31055926

Neighbor

gene id symbol gene type direction distance location
LOC110505784 LOC106611231 coding upstream 14693 31000516 ~ 31040820 (+)
LOC110505785 LOC106611232 coding upstream 55120 30992299 ~ 31000393 (+)
LOC110505776 LOC106611225 coding upstream 208834 30336535 ~ 30846679 (+)
LOC110505775 LOC106611224 coding upstream 724778 30092455 ~ 30330735 (+)
LOC110505773 LOC106611209 coding upstream 978219 30007361 ~ 30077294 (+)
LOC118944303 LOC106611235 coding downstream 24753 31080679 ~ 31082541 (+)
LOC110505788 LOC106611236 coding downstream 47358 31103284 ~ 31109026 (+)
LOC110505789 LOC106611239 coding downstream 158897 31214823 ~ 31220599 (+)
LOC110505790 LOC106611238 coding downstream 165566 31221492 ~ 31271457 (+)
LOC110505794 NA coding downstream 218742 31274668 ~ 31282108 (+)
G1972970 NA non-coding upstream 10888 31044369 ~ 31044625 (+)
G1972969 NA non-coding upstream 11335 31043891 ~ 31044178 (+)
G1972965 NA non-coding upstream 12807 31042457 ~ 31042706 (+)
G1972408 LOC106611229 non-coding upstream 82448 30972171 ~ 30973065 (+)
G1972392 LOC106611229 non-coding upstream 139401 30915738 ~ 30916112 (+)
G1973107 NA non-coding downstream 93441 31149367 ~ 31149567 (+)
G1973118 NA non-coding downstream 97661 31153587 ~ 31153859 (+)
G1973140 NA non-coding downstream 109787 31165713 ~ 31165945 (+)
G1973157 NA non-coding downstream 120954 31176880 ~ 31177158 (+)
G1973160 NA non-coding downstream 122617 31178543 ~ 31178762 (+)
G1972252 NA other upstream 359199 30695233 ~ 30696314 (+)
G1972245 NA other upstream 375518 30659404 ~ 30679995 (+)
G1972244 NA other upstream 400474 30637054 ~ 30655039 (+)
G1972242 NA other upstream 422846 30630328 ~ 30632667 (+)
G1973126 NA other downstream 101592 31157518 ~ 31157736 (+)
G1973193 NA other downstream 147689 31203615 ~ 31203991 (+)
G1973369 NA other downstream 331552 31387478 ~ 31387736 (+)
G1973635 NA other downstream 662598 31718524 ~ 31718968 (+)
G1973669 NA other downstream 731319 31787245 ~ 31789449 (+)

Expression


Co-expression Network