Gene
RNA
| Item | Value |
|---|---|
| gene id | G1973117 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 31152953 ~ 31153306 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2255700 | True | 354 | lncRNA | 0.43 | 1 | 31152953 | 31153306 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504336 | NA | coding | downstream | 4885 | 31114868 ~ 31148068 (-) |
| LOC110505787 | LOC106611255 | coding | downstream | 63655 | 31087360 ~ 31089298 (-) |
| LOC110505783 | LOC106611230 | coding | downstream | 160864 | 30986765 ~ 30992089 (-) |
| LOC110505782 | LOC106611229 | coding | downstream | 167189 | 30913042 ~ 30985764 (-) |
| LOC110505781 | cf12 | coding | downstream | 240160 | 30908975 ~ 30912793 (-) |
| LOC110505792 | NA | coding | upstream | 118743 | 31272049 ~ 31274777 (-) |
| LOC110505798 | LOC106611244 | coding | upstream | 468736 | 31622042 ~ 31632417 (-) |
| LOC110504224 | LOC106611245 | coding | upstream | 479453 | 31632759 ~ 31636055 (-) |
| LOC110505800 | LOC106611246 | coding | upstream | 489442 | 31642748 ~ 31710036 (-) |
| LOC110505801 | LOC106611247 | coding | upstream | 560093 | 31713399 ~ 31741477 (-) |
| G1973082 | NA | non-coding | downstream | 43972 | 31107160 ~ 31108981 (-) |
| G1972999 | NA | non-coding | downstream | 88170 | 31064494 ~ 31064783 (-) |
| G1972973 | NA | non-coding | downstream | 107094 | 31045571 ~ 31045859 (-) |
| G1972967 | NA | non-coding | downstream | 110388 | 31042363 ~ 31042565 (-) |
| G1972937 | NA | non-coding | downstream | 124831 | 30996765 ~ 31028122 (-) |
| G1973120 | NA | non-coding | upstream | 713 | 31154019 ~ 31154258 (-) |
| G1973127 | NA | non-coding | upstream | 4103 | 31157409 ~ 31157639 (-) |
| G1973279 | NA | non-coding | upstream | 48765 | 31202071 ~ 31202413 (-) |
| G1973281 | NA | non-coding | upstream | 53148 | 31206454 ~ 31206766 (-) |
| G1973282 | NA | non-coding | upstream | 55256 | 31208562 ~ 31208771 (-) |
| G1972851 | NA | other | downstream | 387020 | 30764956 ~ 30765933 (-) |
| G1972810 | NA | other | downstream | 469550 | 30616588 ~ 30683403 (-) |
| G1972746 | npas3 | other | downstream | 644895 | 30507551 ~ 30508058 (-) |
| G1972454 | NA | other | downstream | 1170053 | 29982284 ~ 29982900 (-) |
| G1971357 | LOC106611199 | other | downstream | 1627907 | 29522760 ~ 29525046 (-) |
| G1973793 | NA | other | upstream | 431234 | 31584540 ~ 31585046 (-) |
| G1973835 | LOC106611243 | other | upstream | 461115 | 31614421 ~ 31618499 (-) |
| G1974000 | NA | other | upstream | 833137 | 31986443 ~ 31986884 (-) |
| G1975453 | NA | other | upstream | 2166423 | 33319729 ~ 33324325 (-) |
| G1975763 | NA | other | upstream | 2403124 | 33556430 ~ 33556811 (-) |
