G1973140


Basic Information

Item Value
gene id G1973140
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31165713 ~ 31165945 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2255723
CTTCAGATCCCTTTGTTAATCCCACTACGAAGGAGCCCAGAGATCCATCAACAGCtaattcctctcttctctcactgaAATTGCTTAATGATAAACAGTGAGCCTCGCCATAAGCCATTACAAAGTTCAGTAAGAAAATCAATATAGCATTTTAGCTGGAATTTGCTCATTAAACATCCCCTTCCCTGAGCCATGCAAATCATATTGAAATGAGAATGGCAAATAGGCTACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2255723 True 233 lncRNA 0.40 1 31165713 31165945

Neighbor

gene id symbol gene type direction distance location
LOC110505788 LOC106611236 coding upstream 56687 31103284 ~ 31109026 (+)
LOC118944303 LOC106611235 coding upstream 83172 31080679 ~ 31082541 (+)
LOC110505784 LOC106611231 coding upstream 124893 31000516 ~ 31040820 (+)
LOC110505785 LOC106611232 coding upstream 165320 30992299 ~ 31000393 (+)
LOC110505776 LOC106611225 coding upstream 319034 30336535 ~ 30846679 (+)
LOC110505789 LOC106611239 coding downstream 48878 31214823 ~ 31220599 (+)
LOC110505790 LOC106611238 coding downstream 55547 31221492 ~ 31271457 (+)
LOC110505794 NA coding downstream 108723 31274668 ~ 31282108 (+)
LOC110505791 LOC106611240 coding downstream 121957 31287902 ~ 31290986 (+)
LOC110505795 LOC106611242 coding downstream 280966 31446911 ~ 31459466 (+)
G1973118 NA non-coding upstream 11854 31153587 ~ 31153859 (+)
G1973107 NA non-coding upstream 16146 31149367 ~ 31149567 (+)
G1972985 NA non-coding upstream 109787 31055513 ~ 31055926 (+)
G1972970 NA non-coding upstream 121088 31044369 ~ 31044625 (+)
G1972969 NA non-coding upstream 121535 31043891 ~ 31044178 (+)
G1973157 NA non-coding downstream 10935 31176880 ~ 31177158 (+)
G1973160 NA non-coding downstream 12598 31178543 ~ 31178762 (+)
G1973170 NA non-coding downstream 19604 31185549 ~ 31185941 (+)
G1973182 NA non-coding downstream 25715 31191660 ~ 31191940 (+)
G1973197 NA non-coding downstream 41937 31207882 ~ 31208097 (+)
G1973126 NA other upstream 7977 31157518 ~ 31157736 (+)
G1972252 NA other upstream 469399 30695233 ~ 30696314 (+)
G1972245 NA other upstream 485718 30659404 ~ 30679995 (+)
G1972244 NA other upstream 510674 30637054 ~ 30655039 (+)
G1972242 NA other upstream 533046 30630328 ~ 30632667 (+)
G1973193 NA other downstream 37670 31203615 ~ 31203991 (+)
G1973369 NA other downstream 221533 31387478 ~ 31387736 (+)
G1973635 NA other downstream 552579 31718524 ~ 31718968 (+)
G1973669 NA other downstream 621300 31787245 ~ 31789449 (+)
G1973717 NA other downstream 714165 31880110 ~ 31880820 (+)

Expression


Co-expression Network