G1973197


Basic Information

Item Value
gene id G1973197
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31207882 ~ 31208097 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2255780
gttaggatcaccactttattttaagaatgtgaaatgtcagaatagtagagaacaatttatttcagcttttatttctttcatcacattcccagtgggtcagaagtttacatacactcaattagtatttggtagcattgccattaaattgtttaacttgggtcaaacatctTTTCTCTTGTAACCCTTTCCTTTGCGTATTTTGGATGCATTTATGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2255780 True 216 lncRNA 0.33 1 31207882 31208097

Neighbor

gene id symbol gene type direction distance location
LOC110505788 LOC106611236 coding upstream 98856 31103284 ~ 31109026 (+)
LOC118944303 LOC106611235 coding upstream 125341 31080679 ~ 31082541 (+)
LOC110505784 LOC106611231 coding upstream 167062 31000516 ~ 31040820 (+)
LOC110505785 LOC106611232 coding upstream 207489 30992299 ~ 31000393 (+)
LOC110505776 LOC106611225 coding upstream 361203 30336535 ~ 30846679 (+)
LOC110505789 LOC106611239 coding downstream 6726 31214823 ~ 31220599 (+)
LOC110505790 LOC106611238 coding downstream 13395 31221492 ~ 31271457 (+)
LOC110505794 NA coding downstream 66571 31274668 ~ 31282108 (+)
LOC110505791 LOC106611240 coding downstream 79805 31287902 ~ 31290986 (+)
LOC110505795 LOC106611242 coding downstream 238814 31446911 ~ 31459466 (+)
G1973182 NA non-coding upstream 15942 31191660 ~ 31191940 (+)
G1973170 NA non-coding upstream 21941 31185549 ~ 31185941 (+)
G1973160 NA non-coding upstream 29120 31178543 ~ 31178762 (+)
G1973157 NA non-coding upstream 30724 31176880 ~ 31177158 (+)
G1973140 NA non-coding upstream 41937 31165713 ~ 31165945 (+)
G1973219 NA non-coding downstream 69713 31277810 ~ 31278060 (+)
G1973226 NA non-coding downstream 88072 31296169 ~ 31296369 (+)
G1973233 NA non-coding downstream 98315 31306412 ~ 31306667 (+)
G1973238 NA non-coding downstream 103714 31311811 ~ 31312111 (+)
G1973193 NA other upstream 3891 31203615 ~ 31203991 (+)
G1973126 NA other upstream 50146 31157518 ~ 31157736 (+)
G1972252 NA other upstream 511568 30695233 ~ 30696314 (+)
G1972245 NA other upstream 527887 30659404 ~ 30679995 (+)
G1972244 NA other upstream 552843 30637054 ~ 30655039 (+)
G1973369 NA other downstream 179381 31387478 ~ 31387736 (+)
G1973635 NA other downstream 510427 31718524 ~ 31718968 (+)
G1973669 NA other downstream 579148 31787245 ~ 31789449 (+)
G1973717 NA other downstream 672013 31880110 ~ 31880820 (+)
LOC110505805 LOC106602325 other downstream 685886 31807487 ~ 31910358 (+)

Expression


Co-expression Network