Item | Value |
---|---|
gene id | G1973267 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048589.1 |
NCBI id | CM023243.3 |
chromosome length | 47542702 |
location | 31218351 ~ 31219578 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
proteasome subunit alpha type-3 isoform X1 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU2255859 | True | 853 | lncRNA | 0.42 | 2 | 31218351 | 31219578 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110504336 | NA | coding | downstream | 70283 | 31114868 ~ 31148068 (-) |
LOC110505787 | LOC106611255 | coding | downstream | 129053 | 31087360 ~ 31089298 (-) |
LOC110505783 | LOC106611230 | coding | downstream | 226262 | 30986765 ~ 30992089 (-) |
LOC110505782 | LOC106611229 | coding | downstream | 232587 | 30913042 ~ 30985764 (-) |
LOC110505781 | cf12 | coding | downstream | 305558 | 30908975 ~ 30912793 (-) |
LOC110505792 | NA | coding | upstream | 52471 | 31272049 ~ 31274777 (-) |
LOC110505798 | LOC106611244 | coding | upstream | 402464 | 31622042 ~ 31632417 (-) |
LOC110504224 | LOC106611245 | coding | upstream | 413181 | 31632759 ~ 31636055 (-) |
LOC110505800 | LOC106611246 | coding | upstream | 423170 | 31642748 ~ 31710036 (-) |
LOC110505801 | LOC106611247 | coding | upstream | 493821 | 31713399 ~ 31741477 (-) |
G1973284 | NA | non-coding | downstream | 8672 | 31209370 ~ 31209679 (-) |
G1973282 | NA | non-coding | downstream | 9580 | 31208562 ~ 31208771 (-) |
G1973281 | NA | non-coding | downstream | 11585 | 31206454 ~ 31206766 (-) |
G1973279 | NA | non-coding | downstream | 15938 | 31202071 ~ 31202413 (-) |
G1973127 | NA | non-coding | downstream | 60712 | 31157409 ~ 31157639 (-) |
G1973263 | NA | non-coding | upstream | 807 | 31220385 ~ 31266956 (-) |
G1973310 | NA | non-coding | upstream | 56600 | 31276178 ~ 31276475 (-) |
G1973311 | NA | non-coding | upstream | 57326 | 31276904 ~ 31277157 (-) |
G1973316 | LOC106611240 | non-coding | upstream | 68514 | 31288092 ~ 31290968 (-) |
G1972851 | NA | other | downstream | 452418 | 30764956 ~ 30765933 (-) |
G1972810 | NA | other | downstream | 534948 | 30616588 ~ 30683403 (-) |
G1972746 | npas3 | other | downstream | 710293 | 30507551 ~ 30508058 (-) |
G1972454 | NA | other | downstream | 1235451 | 29982284 ~ 29982900 (-) |
G1971357 | LOC106611199 | other | downstream | 1693305 | 29522760 ~ 29525046 (-) |
G1973793 | NA | other | upstream | 364962 | 31584540 ~ 31585046 (-) |
G1973835 | LOC106611243 | other | upstream | 394843 | 31614421 ~ 31618499 (-) |
G1974000 | NA | other | upstream | 766865 | 31986443 ~ 31986884 (-) |
G1975453 | NA | other | upstream | 2100151 | 33319729 ~ 33324325 (-) |
G1975763 | NA | other | upstream | 2336852 | 33556430 ~ 33556811 (-) |
species | gene id | symbol | gene type | chromosome | NCBI id | location |
---|---|---|---|---|---|---|
bowfin (Amia calva) | G151446 | psma3,LOC107729246,LOC107725600 | non-coding | CM030141.1 | CM030141.1 | 19612250 ~ 19619068 (-) |
mexican tetra (Astyanax mexicanus) | G140822 | NA | non-coding | NC_035912.1 | CM008315.1 | 11806832 ~ 11807230 (-) |