G1973354


Basic Information

Item Value
gene id G1973354
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31369232 ~ 31369601 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2255946
gtatgtggtcctaaccagtgttcctgttagacagtatgtggtcctaaccagtgttcctgttagacagtatgtggtctcTGTCAGTGTTcctgttagacagtatgtggtcacTGTCAGTGTTcctgttagacagtatgtggtcctaaccagtgttcctgttagacagtatgtggtcttaaccagtgttcctgttagacagtatgtggtcctaaccagtgttcctgttagacagtatgtggtcacTGTCAGTGTTcctgttagacagtatgtggtcctaaccagtgttcctgttagacagtatgtggtcacTGTCAGTGTTcctgttagacagtatgtggtcctaaccagtgttcctgttagacagtatgtg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106579891

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2255946 True 370 lncRNA 0.45 1 31369232 31369601

Neighbor

gene id symbol gene type direction distance location
LOC110505791 LOC106611240 coding upstream 78246 31287902 ~ 31290986 (+)
LOC110505794 NA coding upstream 87124 31274668 ~ 31282108 (+)
LOC110505790 LOC106611238 coding upstream 97775 31221492 ~ 31271457 (+)
LOC110505789 LOC106611239 coding upstream 148633 31214823 ~ 31220599 (+)
LOC110505788 LOC106611236 coding upstream 260206 31103284 ~ 31109026 (+)
LOC110505795 LOC106611242 coding downstream 77310 31446911 ~ 31459466 (+)
LOC110505796 leg3 coding downstream 206882 31576483 ~ 31587632 (+)
LOC110505797 LOC106611243 coding downstream 220288 31589889 ~ 31618525 (+)
LOC118944345 NA coding downstream 270695 31640296 ~ 31642746 (+)
trnaa-ugc-181 NA coding downstream 320599 31690200 ~ 31690275 (+)
G1973351 NA non-coding upstream 3109 31365910 ~ 31366123 (+)
G1973348 NA non-coding upstream 5986 31363036 ~ 31363246 (+)
G1973250 NA non-coding upstream 29776 31339255 ~ 31339456 (+)
G1973238 NA non-coding upstream 57121 31311811 ~ 31312111 (+)
G1973233 NA non-coding upstream 62565 31306412 ~ 31306667 (+)
G1973358 NA non-coding downstream 7018 31376619 ~ 31376993 (+)
G1973362 NA non-coding downstream 9459 31379060 ~ 31379260 (+)
G1973364 NA non-coding downstream 15426 31385027 ~ 31385248 (+)
G1973366 NA non-coding downstream 16434 31386035 ~ 31386249 (+)
G1973367 NA non-coding downstream 16810 31386411 ~ 31386624 (+)
G1973193 NA other upstream 165241 31203615 ~ 31203991 (+)
G1973126 NA other upstream 211496 31157518 ~ 31157736 (+)
G1972252 NA other upstream 672918 30695233 ~ 30696314 (+)
G1972245 NA other upstream 689237 30659404 ~ 30679995 (+)
G1972244 NA other upstream 714193 30637054 ~ 30655039 (+)
G1973369 NA other downstream 17877 31387478 ~ 31387736 (+)
G1973635 NA other downstream 348923 31718524 ~ 31718968 (+)
G1973669 NA other downstream 417644 31787245 ~ 31789449 (+)
G1973717 NA other downstream 510509 31880110 ~ 31880820 (+)
LOC110505805 LOC106602325 other downstream 524382 31807487 ~ 31910358 (+)

Expression


Co-expression Network