G1973379


Basic Information

Item Value
gene id G1973379
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31402439 ~ 31402668 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2255975
atagggagtagggtaccatttTGGACACAACCTATGTTTTCAGGCCTGATTTCACCATCCGCCCTCCACAGCTGCACTGCTATGTCTAACAGGCAACAGCTGCAACTAGCAGGACATGTGAGAGAGATTTagggacagggtgaagagagaaTGTTCcgttccaaatagcaccctattcaatTTATAGTTCCCATTttctctctggtcaaaagtattccactatatagaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2255975 True 230 lncRNA 0.44 1 31402439 31402668

Neighbor

gene id symbol gene type direction distance location
LOC110505791 LOC106611240 coding upstream 111453 31287902 ~ 31290986 (+)
LOC110505794 NA coding upstream 120331 31274668 ~ 31282108 (+)
LOC110505790 LOC106611238 coding upstream 130982 31221492 ~ 31271457 (+)
LOC110505789 LOC106611239 coding upstream 181840 31214823 ~ 31220599 (+)
LOC110505788 LOC106611236 coding upstream 293413 31103284 ~ 31109026 (+)
LOC110505795 LOC106611242 coding downstream 44243 31446911 ~ 31459466 (+)
LOC110505796 leg3 coding downstream 173815 31576483 ~ 31587632 (+)
LOC110505797 LOC106611243 coding downstream 187221 31589889 ~ 31618525 (+)
LOC118944345 NA coding downstream 237628 31640296 ~ 31642746 (+)
trnaa-ugc-181 NA coding downstream 287532 31690200 ~ 31690275 (+)
G1973378 NA non-coding upstream 591 31401626 ~ 31401848 (+)
G1973377 NA non-coding upstream 2210 31400018 ~ 31400229 (+)
G1973375 NA non-coding upstream 6761 31395389 ~ 31395678 (+)
G1973368 NA non-coding upstream 15099 31387137 ~ 31387340 (+)
G1973367 NA non-coding upstream 15815 31386411 ~ 31386624 (+)
G1973380 NA non-coding downstream 553 31403221 ~ 31403420 (+)
G1973381 NA non-coding downstream 1107 31403775 ~ 31404027 (+)
G1973382 NA non-coding downstream 1891 31404559 ~ 31404767 (+)
G1973383 NA non-coding downstream 2143 31404811 ~ 31405043 (+)
G1973389 NA non-coding downstream 14071 31416739 ~ 31416945 (+)
G1973369 NA other upstream 14703 31387478 ~ 31387736 (+)
G1973193 NA other upstream 198448 31203615 ~ 31203991 (+)
G1973126 NA other upstream 244703 31157518 ~ 31157736 (+)
G1972252 NA other upstream 706125 30695233 ~ 30696314 (+)
G1972245 NA other upstream 722444 30659404 ~ 30679995 (+)
G1973635 NA other downstream 315856 31718524 ~ 31718968 (+)
G1973669 NA other downstream 384577 31787245 ~ 31789449 (+)
G1973717 NA other downstream 477442 31880110 ~ 31880820 (+)
LOC110505805 LOC106602325 other downstream 491315 31807487 ~ 31910358 (+)
LOC110510947 LOC106611254 other downstream 618637 32021272 ~ 32135673 (+)

Expression


Co-expression Network