G1973381


Basic Information

Item Value
gene id G1973381
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31403775 ~ 31404027 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2255977
ATGGGAGTCAAGGGATGAGTCCCAAagggcactctattccctatatagtgcactacttttgaccaggttcaGGTCCAGTAATAATGCCCCATAaagggaatatggtaccatttgggatgcagcctataTGTGTTTACATAGTTAGTAGGTTAATAATAGCAGTAGCAGCATGACTGTTGTTAGCGTAGCTACAAGGGGCCTCTTAACTAACTGGATTAGTTAGAACACGTTGTCTTTTTCCTTGAAATAAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2255977 True 253 lncRNA 0.42 1 31403775 31404027

Neighbor

gene id symbol gene type direction distance location
LOC110505791 LOC106611240 coding upstream 112789 31287902 ~ 31290986 (+)
LOC110505794 NA coding upstream 121667 31274668 ~ 31282108 (+)
LOC110505790 LOC106611238 coding upstream 132318 31221492 ~ 31271457 (+)
LOC110505789 LOC106611239 coding upstream 183176 31214823 ~ 31220599 (+)
LOC110505788 LOC106611236 coding upstream 294749 31103284 ~ 31109026 (+)
LOC110505795 LOC106611242 coding downstream 42884 31446911 ~ 31459466 (+)
LOC110505796 leg3 coding downstream 172456 31576483 ~ 31587632 (+)
LOC110505797 LOC106611243 coding downstream 185862 31589889 ~ 31618525 (+)
LOC118944345 NA coding downstream 236269 31640296 ~ 31642746 (+)
trnaa-ugc-181 NA coding downstream 286173 31690200 ~ 31690275 (+)
G1973380 NA non-coding upstream 355 31403221 ~ 31403420 (+)
G1973379 NA non-coding upstream 1107 31402439 ~ 31402668 (+)
G1973378 NA non-coding upstream 1927 31401626 ~ 31401848 (+)
G1973377 NA non-coding upstream 3546 31400018 ~ 31400229 (+)
G1973375 NA non-coding upstream 8097 31395389 ~ 31395678 (+)
G1973382 NA non-coding downstream 532 31404559 ~ 31404767 (+)
G1973383 NA non-coding downstream 784 31404811 ~ 31405043 (+)
G1973389 NA non-coding downstream 12712 31416739 ~ 31416945 (+)
G1973390 NA non-coding downstream 14473 31418500 ~ 31418699 (+)
G1973393 NA non-coding downstream 20308 31424335 ~ 31424634 (+)
G1973369 NA other upstream 16039 31387478 ~ 31387736 (+)
G1973193 NA other upstream 199784 31203615 ~ 31203991 (+)
G1973126 NA other upstream 246039 31157518 ~ 31157736 (+)
G1972252 NA other upstream 707461 30695233 ~ 30696314 (+)
G1972245 NA other upstream 723780 30659404 ~ 30679995 (+)
G1973635 NA other downstream 314497 31718524 ~ 31718968 (+)
G1973669 NA other downstream 383218 31787245 ~ 31789449 (+)
G1973717 NA other downstream 476083 31880110 ~ 31880820 (+)
LOC110505805 LOC106602325 other downstream 489956 31807487 ~ 31910358 (+)
LOC110510947 LOC106611254 other downstream 617278 32021272 ~ 32135673 (+)

Expression


Co-expression Network