G1973382


Basic Information

Item Value
gene id G1973382
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31404559 ~ 31404767 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2255978
cactgggtacacacacacacacacacacacacacacacacactgggcacacacacacccacacaatggacacacacacacacacacactgaacacacacacacactctttgcaAGCACTCACACTGCCCATCCCCCAGCCCCATTGACTGACTGGAACACAATGAAAGGCTCAGAGGTTAGGTGACCATCGGTGTGGATTGGATTAGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2255978 True 209 lncRNA 0.52 1 31404559 31404767

Neighbor

gene id symbol gene type direction distance location
LOC110505791 LOC106611240 coding upstream 113573 31287902 ~ 31290986 (+)
LOC110505794 NA coding upstream 122451 31274668 ~ 31282108 (+)
LOC110505790 LOC106611238 coding upstream 133102 31221492 ~ 31271457 (+)
LOC110505789 LOC106611239 coding upstream 183960 31214823 ~ 31220599 (+)
LOC110505788 LOC106611236 coding upstream 295533 31103284 ~ 31109026 (+)
LOC110505795 LOC106611242 coding downstream 42144 31446911 ~ 31459466 (+)
LOC110505796 leg3 coding downstream 171716 31576483 ~ 31587632 (+)
LOC110505797 LOC106611243 coding downstream 185122 31589889 ~ 31618525 (+)
LOC118944345 NA coding downstream 235529 31640296 ~ 31642746 (+)
trnaa-ugc-181 NA coding downstream 285433 31690200 ~ 31690275 (+)
G1973381 NA non-coding upstream 532 31403775 ~ 31404027 (+)
G1973380 NA non-coding upstream 1139 31403221 ~ 31403420 (+)
G1973379 NA non-coding upstream 1891 31402439 ~ 31402668 (+)
G1973378 NA non-coding upstream 2711 31401626 ~ 31401848 (+)
G1973377 NA non-coding upstream 4330 31400018 ~ 31400229 (+)
G1973383 NA non-coding downstream 44 31404811 ~ 31405043 (+)
G1973389 NA non-coding downstream 11972 31416739 ~ 31416945 (+)
G1973390 NA non-coding downstream 13733 31418500 ~ 31418699 (+)
G1973393 NA non-coding downstream 19568 31424335 ~ 31424634 (+)
G1973394 NA non-coding downstream 20035 31424802 ~ 31425161 (+)
G1973369 NA other upstream 16823 31387478 ~ 31387736 (+)
G1973193 NA other upstream 200568 31203615 ~ 31203991 (+)
G1973126 NA other upstream 246823 31157518 ~ 31157736 (+)
G1972252 NA other upstream 708245 30695233 ~ 30696314 (+)
G1972245 NA other upstream 724564 30659404 ~ 30679995 (+)
G1973635 NA other downstream 313757 31718524 ~ 31718968 (+)
G1973669 NA other downstream 382478 31787245 ~ 31789449 (+)
G1973717 NA other downstream 475343 31880110 ~ 31880820 (+)
LOC110505805 LOC106602325 other downstream 489216 31807487 ~ 31910358 (+)
LOC110510947 LOC106611254 other downstream 616538 32021272 ~ 32135673 (+)

Expression


Co-expression Network