G1973389


Basic Information

Item Value
gene id G1973389
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31416739 ~ 31416945 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2255985
atgtaaaccagggctctggtcaaaagtagtgcactatatagggaatagggtgccatttaggacgcacACCTGTCTAACTATTCGATCAAAACTGcaatatacactcagtggccatcCAGTACTGAGTCGGATACCCCTTTGCCTCCAAAACAGCCTGAATCAAAGGACCTAAcctgtgccaggaaaacattccccacaccattataC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2255985 True 207 lncRNA 0.46 1 31416739 31416945

Neighbor

gene id symbol gene type direction distance location
LOC110505791 LOC106611240 coding upstream 125753 31287902 ~ 31290986 (+)
LOC110505794 NA coding upstream 134631 31274668 ~ 31282108 (+)
LOC110505790 LOC106611238 coding upstream 145282 31221492 ~ 31271457 (+)
LOC110505789 LOC106611239 coding upstream 196140 31214823 ~ 31220599 (+)
LOC110505788 LOC106611236 coding upstream 307713 31103284 ~ 31109026 (+)
LOC110505795 LOC106611242 coding downstream 29966 31446911 ~ 31459466 (+)
LOC110505796 leg3 coding downstream 159538 31576483 ~ 31587632 (+)
LOC110505797 LOC106611243 coding downstream 172944 31589889 ~ 31618525 (+)
LOC118944345 NA coding downstream 223351 31640296 ~ 31642746 (+)
trnaa-ugc-181 NA coding downstream 273255 31690200 ~ 31690275 (+)
G1973383 NA non-coding upstream 11696 31404811 ~ 31405043 (+)
G1973382 NA non-coding upstream 11972 31404559 ~ 31404767 (+)
G1973381 NA non-coding upstream 12712 31403775 ~ 31404027 (+)
G1973380 NA non-coding upstream 13319 31403221 ~ 31403420 (+)
G1973379 NA non-coding upstream 14071 31402439 ~ 31402668 (+)
G1973390 NA non-coding downstream 1555 31418500 ~ 31418699 (+)
G1973393 NA non-coding downstream 7390 31424335 ~ 31424634 (+)
G1973394 NA non-coding downstream 7857 31424802 ~ 31425161 (+)
G1973397 NA non-coding downstream 11502 31428447 ~ 31432564 (+)
G1973458 NA non-coding downstream 43656 31460601 ~ 31460879 (+)
G1973369 NA other upstream 29003 31387478 ~ 31387736 (+)
G1973193 NA other upstream 212748 31203615 ~ 31203991 (+)
G1973126 NA other upstream 259003 31157518 ~ 31157736 (+)
G1972252 NA other upstream 720425 30695233 ~ 30696314 (+)
G1972245 NA other upstream 736744 30659404 ~ 30679995 (+)
G1973635 NA other downstream 301579 31718524 ~ 31718968 (+)
G1973669 NA other downstream 370300 31787245 ~ 31789449 (+)
G1973717 NA other downstream 463165 31880110 ~ 31880820 (+)
LOC110505805 LOC106602325 other downstream 477038 31807487 ~ 31910358 (+)
LOC110510947 LOC106611254 other downstream 604360 32021272 ~ 32135673 (+)

Expression


Co-expression Network