G1973390


Basic Information

Item Value
gene id G1973390
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31418500 ~ 31418699 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2255986
ctctcttacctctctctctctcatgaaggAATTGAAAATTGCCTGAACTTTGGTCCATCTGCTCAGCAGAGACAGACATCCTTGCATTTGGGCCCTTCCAAATGTTGTTTTGCAAACACACTGTCAATAGTAGAATCTAGGCCTTGGAGGGTTTTCGTCCCACGAGACCCTCCATGTCTAAAAACAGTGATGTCTTTCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2255986 True 200 lncRNA 0.45 1 31418500 31418699

Neighbor

gene id symbol gene type direction distance location
LOC110505791 LOC106611240 coding upstream 127514 31287902 ~ 31290986 (+)
LOC110505794 NA coding upstream 136392 31274668 ~ 31282108 (+)
LOC110505790 LOC106611238 coding upstream 147043 31221492 ~ 31271457 (+)
LOC110505789 LOC106611239 coding upstream 197901 31214823 ~ 31220599 (+)
LOC110505788 LOC106611236 coding upstream 309474 31103284 ~ 31109026 (+)
LOC110505795 LOC106611242 coding downstream 28212 31446911 ~ 31459466 (+)
LOC110505796 leg3 coding downstream 157784 31576483 ~ 31587632 (+)
LOC110505797 LOC106611243 coding downstream 171190 31589889 ~ 31618525 (+)
LOC118944345 NA coding downstream 221597 31640296 ~ 31642746 (+)
trnaa-ugc-181 NA coding downstream 271501 31690200 ~ 31690275 (+)
G1973389 NA non-coding upstream 1555 31416739 ~ 31416945 (+)
G1973383 NA non-coding upstream 13457 31404811 ~ 31405043 (+)
G1973382 NA non-coding upstream 13733 31404559 ~ 31404767 (+)
G1973381 NA non-coding upstream 14473 31403775 ~ 31404027 (+)
G1973380 NA non-coding upstream 15080 31403221 ~ 31403420 (+)
G1973393 NA non-coding downstream 5636 31424335 ~ 31424634 (+)
G1973394 NA non-coding downstream 6103 31424802 ~ 31425161 (+)
G1973397 NA non-coding downstream 9748 31428447 ~ 31432564 (+)
G1973458 NA non-coding downstream 41902 31460601 ~ 31460879 (+)
G1973462 NA non-coding downstream 45306 31464005 ~ 31464286 (+)
G1973369 NA other upstream 30764 31387478 ~ 31387736 (+)
G1973193 NA other upstream 214509 31203615 ~ 31203991 (+)
G1973126 NA other upstream 260764 31157518 ~ 31157736 (+)
G1972252 NA other upstream 722186 30695233 ~ 30696314 (+)
G1972245 NA other upstream 738505 30659404 ~ 30679995 (+)
G1973635 NA other downstream 299825 31718524 ~ 31718968 (+)
G1973669 NA other downstream 368546 31787245 ~ 31789449 (+)
G1973717 NA other downstream 461411 31880110 ~ 31880820 (+)
LOC110505805 LOC106602325 other downstream 475284 31807487 ~ 31910358 (+)
LOC110510947 LOC106611254 other downstream 602606 32021272 ~ 32135673 (+)

Expression


Co-expression Network