G1973462


Basic Information

Item Value
gene id G1973462
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31464005 ~ 31464286 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2256064
tccccagcacaaggtgcacctgtgtaatgaccatgctgtttaataagctgtcaggtggatggattatcttggcaatggagaaatactcactaacagatttgtgcacaaaatctgagcaaataagatttttgtgcatatggaacattttggggatctttaatttcagctcatgaaacatgggaccaacactttacatagtgcatttacatttttgttcagaatTTAGATCTTTCTAGAATCTCCAGTACTGAAGCGTTGCTTCAGATTCACAAATGCCTAAAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2256064 True 282 lncRNA 0.38 1 31464005 31464286

Neighbor

gene id symbol gene type direction distance location
LOC110505795 LOC106611242 coding upstream 4539 31446911 ~ 31459466 (+)
LOC110505791 LOC106611240 coding upstream 173019 31287902 ~ 31290986 (+)
LOC110505794 NA coding upstream 181897 31274668 ~ 31282108 (+)
LOC110505790 LOC106611238 coding upstream 192548 31221492 ~ 31271457 (+)
LOC110505789 LOC106611239 coding upstream 243406 31214823 ~ 31220599 (+)
LOC110505796 leg3 coding downstream 112197 31576483 ~ 31587632 (+)
LOC110505797 LOC106611243 coding downstream 125603 31589889 ~ 31618525 (+)
LOC118944345 NA coding downstream 176010 31640296 ~ 31642746 (+)
trnaa-ugc-181 NA coding downstream 225914 31690200 ~ 31690275 (+)
LOC110505805 LOC106602325 coding downstream 343201 31807487 ~ 31910358 (+)
G1973458 NA non-coding upstream 3126 31460601 ~ 31460879 (+)
G1973397 NA non-coding upstream 31441 31428447 ~ 31432564 (+)
G1973394 NA non-coding upstream 38844 31424802 ~ 31425161 (+)
G1973393 NA non-coding upstream 39371 31424335 ~ 31424634 (+)
G1973390 NA non-coding upstream 45306 31418500 ~ 31418699 (+)
G1973563 NA non-coding downstream 144124 31608410 ~ 31608620 (+)
G1973564 NA non-coding downstream 145072 31609358 ~ 31609657 (+)
G1973568 NA non-coding downstream 148766 31613052 ~ 31613300 (+)
G1973605 NA non-coding downstream 209211 31673497 ~ 31675409 (+)
G1973369 NA other upstream 76269 31387478 ~ 31387736 (+)
G1973193 NA other upstream 260014 31203615 ~ 31203991 (+)
G1973126 NA other upstream 306269 31157518 ~ 31157736 (+)
G1972252 NA other upstream 767691 30695233 ~ 30696314 (+)
G1972245 NA other upstream 784010 30659404 ~ 30679995 (+)
G1973635 NA other downstream 254238 31718524 ~ 31718968 (+)
G1973669 NA other downstream 322959 31787245 ~ 31789449 (+)
G1973717 NA other downstream 415824 31880110 ~ 31880820 (+)
LOC110510947 LOC106611254 other downstream 557019 32021272 ~ 32135673 (+)

Expression


Co-expression Network