G1973563


Basic Information

Item Value
gene id G1973563
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31608410 ~ 31608620 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2256167
TGACGGCCCAGTTTCACCTAGTTCCATCCTCTCCCACTACCTGCGACTggacttcctctcactaccatatttggtggtgTGAAAACGTTCTAAACGGATTCAGCTTTATAGCCCCGTGTCTGGGTTTTCACTTCTGTCTTTACCTCAGTTTGTCGTGGAAAACATGCGTGCTAACGAGAACTTCAGTATGGCGCGTCTTCAGTGGTATGAC

Function

NR:

description
polycomb complex protein BMI-1-B-like isoform X2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2256167 True 211 lncRNA 0.48 1 31608410 31608620

Neighbor

gene id symbol gene type direction distance location
LOC110505796 leg3 coding upstream 20778 31576483 ~ 31587632 (+)
LOC110505795 LOC106611242 coding upstream 148944 31446911 ~ 31459466 (+)
LOC110505791 LOC106611240 coding upstream 317424 31287902 ~ 31290986 (+)
LOC110505794 NA coding upstream 326302 31274668 ~ 31282108 (+)
LOC110505790 LOC106611238 coding upstream 336953 31221492 ~ 31271457 (+)
LOC118944345 NA coding downstream 31676 31640296 ~ 31642746 (+)
trnaa-ugc-181 NA coding downstream 81580 31690200 ~ 31690275 (+)
LOC110505805 LOC106602325 coding downstream 198867 31807487 ~ 31910358 (+)
LOC110504226 LOC100195551 coding downstream 326112 31934732 ~ 31977371 (+)
LOC110510947 LOC106611254 coding downstream 412652 32021272 ~ 32135673 (+)
G1973462 NA non-coding upstream 144124 31464005 ~ 31464286 (+)
G1973458 NA non-coding upstream 147531 31460601 ~ 31460879 (+)
G1973397 NA non-coding upstream 175846 31428447 ~ 31432564 (+)
G1973394 NA non-coding upstream 183249 31424802 ~ 31425161 (+)
G1973393 NA non-coding upstream 183776 31424335 ~ 31424634 (+)
G1973564 NA non-coding downstream 738 31609358 ~ 31609657 (+)
G1973568 NA non-coding downstream 4432 31613052 ~ 31613300 (+)
G1973605 NA non-coding downstream 64877 31673497 ~ 31675409 (+)
G1973633 LOC106611247 non-coding downstream 104813 31713433 ~ 31715906 (+)
G1973369 NA other upstream 220674 31387478 ~ 31387736 (+)
G1973193 NA other upstream 404419 31203615 ~ 31203991 (+)
G1973126 NA other upstream 450674 31157518 ~ 31157736 (+)
G1972252 NA other upstream 912096 30695233 ~ 30696314 (+)
G1972245 NA other upstream 928415 30659404 ~ 30679995 (+)
G1973635 NA other downstream 109904 31718524 ~ 31718968 (+)
G1973669 NA other downstream 178625 31787245 ~ 31789449 (+)
G1973717 NA other downstream 271490 31880110 ~ 31880820 (+)

Expression


Co-expression Network