G1973564


Basic Information

Item Value
gene id G1973564
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31609358 ~ 31609657 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2256168
CAACATGTTTGGGGATGTAGGTGTCATCTTATCTGTAGCCAATAATGATGTTGGAAAGGATTTGTTTAATTTGGCTTTGTATTAATTTAGCACAGAATGTATTCATTCATGTCAGAAGTGATGATCTCTGCCCTGACACTTGTTTTATCCATGTCTGATGGAATTGCGATGTCACCCAATTCATAATTGCAGTATCTGGGCCAAAAAATAGAAATGAGATATTTTGTCAATCGTACAGCTTTATTTGTTTGGGGTTTGTTTACCTAGCCAGAAAAGTATATTGTTTACCTCGTATGTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2256168 True 300 lncRNA 0.35 1 31609358 31609657

Neighbor

gene id symbol gene type direction distance location
LOC110505796 leg3 coding upstream 21726 31576483 ~ 31587632 (+)
LOC110505795 LOC106611242 coding upstream 149892 31446911 ~ 31459466 (+)
LOC110505791 LOC106611240 coding upstream 318372 31287902 ~ 31290986 (+)
LOC110505794 NA coding upstream 327250 31274668 ~ 31282108 (+)
LOC110505790 LOC106611238 coding upstream 337901 31221492 ~ 31271457 (+)
LOC118944345 NA coding downstream 30639 31640296 ~ 31642746 (+)
trnaa-ugc-181 NA coding downstream 80543 31690200 ~ 31690275 (+)
LOC110505805 LOC106602325 coding downstream 197830 31807487 ~ 31910358 (+)
LOC110504226 LOC100195551 coding downstream 325075 31934732 ~ 31977371 (+)
LOC110510947 LOC106611254 coding downstream 411615 32021272 ~ 32135673 (+)
G1973563 NA non-coding upstream 738 31608410 ~ 31608620 (+)
G1973462 NA non-coding upstream 145072 31464005 ~ 31464286 (+)
G1973458 NA non-coding upstream 148479 31460601 ~ 31460879 (+)
G1973397 NA non-coding upstream 176794 31428447 ~ 31432564 (+)
G1973394 NA non-coding upstream 184197 31424802 ~ 31425161 (+)
G1973568 NA non-coding downstream 3395 31613052 ~ 31613300 (+)
G1973605 NA non-coding downstream 63840 31673497 ~ 31675409 (+)
G1973633 LOC106611247 non-coding downstream 103776 31713433 ~ 31715906 (+)
G1973649 LOC106611247 non-coding downstream 122004 31731661 ~ 31733672 (+)
G1973369 NA other upstream 221622 31387478 ~ 31387736 (+)
G1973193 NA other upstream 405367 31203615 ~ 31203991 (+)
G1973126 NA other upstream 451622 31157518 ~ 31157736 (+)
G1972252 NA other upstream 913044 30695233 ~ 30696314 (+)
G1972245 NA other upstream 929363 30659404 ~ 30679995 (+)
G1973635 NA other downstream 108867 31718524 ~ 31718968 (+)
G1973669 NA other downstream 177588 31787245 ~ 31789449 (+)
G1973717 NA other downstream 270453 31880110 ~ 31880820 (+)

Expression


Co-expression Network