G1973568


Basic Information

Item Value
gene id G1973568
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31613052 ~ 31613300 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2256172
ttgttttactgtggatatagatacttttgtacccgtttcctccagcatcttcaaggccctttgctgttctgggattgatttgcacttttcgcaccaaagtacgttcatctctaggagacagaacgcttctccttcctgagcggtatgacggttgcgtagtcccatggtgtttatacttctgttctattgtttgtgcagatgaacgtggtaccttcaggcgtttgcaaattgctcccaaggatgagccag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2256172 True 249 lncRNA 0.46 1 31613052 31613300

Neighbor

gene id symbol gene type direction distance location
LOC110505796 leg3 coding upstream 25420 31576483 ~ 31587632 (+)
LOC110505795 LOC106611242 coding upstream 153586 31446911 ~ 31459466 (+)
LOC110505791 LOC106611240 coding upstream 322066 31287902 ~ 31290986 (+)
LOC110505794 NA coding upstream 330944 31274668 ~ 31282108 (+)
LOC110505790 LOC106611238 coding upstream 341595 31221492 ~ 31271457 (+)
LOC118944345 NA coding downstream 26996 31640296 ~ 31642746 (+)
trnaa-ugc-181 NA coding downstream 76900 31690200 ~ 31690275 (+)
LOC110505805 LOC106602325 coding downstream 194187 31807487 ~ 31910358 (+)
LOC110504226 LOC100195551 coding downstream 321432 31934732 ~ 31977371 (+)
LOC110510947 LOC106611254 coding downstream 407972 32021272 ~ 32135673 (+)
G1973564 NA non-coding upstream 3395 31609358 ~ 31609657 (+)
G1973563 NA non-coding upstream 4432 31608410 ~ 31608620 (+)
G1973462 NA non-coding upstream 148766 31464005 ~ 31464286 (+)
G1973458 NA non-coding upstream 152173 31460601 ~ 31460879 (+)
G1973397 NA non-coding upstream 180488 31428447 ~ 31432564 (+)
G1973605 NA non-coding downstream 60197 31673497 ~ 31675409 (+)
G1973633 LOC106611247 non-coding downstream 100133 31713433 ~ 31715906 (+)
G1973649 LOC106611247 non-coding downstream 118361 31731661 ~ 31733672 (+)
G1973646 NA non-coding downstream 127543 31740843 ~ 31741517 (+)
G1973369 NA other upstream 225316 31387478 ~ 31387736 (+)
G1973193 NA other upstream 409061 31203615 ~ 31203991 (+)
G1973126 NA other upstream 455316 31157518 ~ 31157736 (+)
G1972252 NA other upstream 916738 30695233 ~ 30696314 (+)
G1972245 NA other upstream 933057 30659404 ~ 30679995 (+)
G1973635 NA other downstream 105224 31718524 ~ 31718968 (+)
G1973669 NA other downstream 173945 31787245 ~ 31789449 (+)
G1973717 NA other downstream 266810 31880110 ~ 31880820 (+)

Expression


Co-expression Network