G1973835 (LOC106611243)


Basic Information

Item Value
gene id G1973835
gene name LOC106611243
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31614421 ~ 31618499 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2256505
CGCTTTATTGGAAGTAAAATGCATTTACAGAGAATACAGCAGGAATATAcaacaaagtaaaaaaaatatatctggGAGCAAACTACTTTTAGAGACCATTATTTTTCCCATTTGTCATCAATCCTGATTCTTTTTCTTTTAGATCATGTCCAGTTAAAGTCATTGTAAAGAACAGAAACACTGAGGTGACATTTCCCATGTTTCCCTTCAAGAAGTTATAGCATTATAAAAAGAGGGATATTAATAACAAactcgtcccaaatggcactcttttTCCCTATATAATAacgcactactttcgaccagagccttatgggccctagtcaaaagtagtgcattatatagggaagtGTGTGCCATTTCCAacacacataaaaaaaaatgttagagGAAAAAAAACTGCGAGCTGTAATAAGCATATGGGTTACAGACTGGGTTATACATCTGGGACCCACTGCAAAAAAAACACCCAATAATAATTCAGCAATATACACATGACAGGGTAAATACCTTTCTTTTTACCAAACTGAAGCTAATAAATGCATTCAAGTCAAGTCATAGATACTCGTGCTGCTCGTCACTCTTATTCTCCCTGTTTTTGATATAGGACTCTGTAGCACTATGTACAATGTAAACACAACCGGCACAGAACAAACTAGTTTCAATCAGATCCAAAACCAACAACAAAGCCTCTCTGACCCGGAGCCTGATATAGTGGAGTGGGGATATAGATTCCATtacccaaatggcgccctattccctatatagtgcactacctttgaccagagccctgtgggtgccttatatagggaatagagtgccatttgggaagcaaccgGGATATGGAATAGGGTTGATTCATATTTTGCATAAACCGAGGTCCTGCAGCCATGTATGTATTCACTTAGACAACATAACACACACTGAGTAAATCACTTGTGGGTGGGATACACTGCATAACATTGATAGGCTTTACCTTGACTAAAGTATCTATTCCAATGTAACGGTCGGTTGATGCATAAGGAAAGAGCTATGGTAAGGAGGGACACATTAAGCATCAACACTGAAGACAAATACTCATTAAAGCTCTTCTCTTCAACACACACTTATCAGAACCAGAGTTTATGCTTCAACCCAAAACATTGAAGCAAGTAAATAGAATACCCTGACAGAATCCTTTGAGGATTGAGAATTCTGACCACGGTTAAAGTGCTCACAatctcagaggacctgaggggtcagaggttaggggtcaGGAGGGGGAAGTGGTAAAGGAAGAGATCCAGCGATTCCTCATCAGTATCAGCAACATGATTTCCCTCAAACTCCCCACAAATAAATGCACATATGGCAACAGACAGACATCAGCCCTAAGAAGAAAGGAAGTGCACAGAAGTCAAGTCAGTTCTCCTCCCATTGTCTGTACCACTACTCCTCAGAGACCTTCCTGGGTTTCTTATAGATTGGCATGTTGATACTATGGAAGGCGGGCACCCAGCGGTTGTCATGGAGACCGACGTTGCAGCCGGGCGTGTCTTTGTGGGAGCCATGGCAACACATCCAGTACCCGGGGCCGTAGGGTAGCGCCTGGCAGTAGGGCTTGTGGTGCCAGCGGCAGAGGGACACGTCTCCGCGCCCATTCCGCTTTTTACACTGCTTGCAGGGATCGTCTTTGTAGCGGGGGTCGCACACCCAGCGGGAGTCCGCGGGGCGCACGCCGTAGCTCTCCATGATGAACTTGAAATAGTGGCAGGTGCACTTGAGCGCAGCCAGGCTCTCTGTGGGCAGCAGGCAGAAGATCTTGATGATGATGTGGTGAGGCAGGAAGGACATGTACTGCTGGGGTTCCAGAAGCAGCTGGATTTTAAAGCGCATCTCCAGGAACTCGTGAGACACCATGCGGCGCAGGGGGAAAGGCATTGTCTCACACCGGCTAACatcactcccctctccctcactcaccgCCTCGTCCTCCTCTTTGGCCCAGTTCTCACTGTGCGATATGGGTTCAGGGAGTAGAGAAGTGATAGAAGGGTCACAGGGCTGAATCTTGGAGGGTTCTGCTGAGTCTCTGGTGGGTTTAGGGCTGGATTCCATTTcctggggggtgtgtgtgtgggtgggagtattgactgtgtgtgggagtgtgtgttcaAGTACCACCTGTGAGGGCAGAGTGTGTGAGAAGAACAGCATGCCTGGGAGGGGCTCCGCACACTGTAGTTTACTACTGCTCTCTGTACTGCTGGACCTGGCCTGCTCTGACAGGAGCTGGAAGTGCAGGTTCTGCCCAGACTCTACAGCCCTGTTCTTCTTCTGCTGCCCCGGGCCCTGGGCCTCACAGCGCTCCTCTGGCTCTCTGACGACAGAGGCGCCACACCCAGAGTCCATGCTGCGAGACGGAGAGGCTGAGTCAGAGGTGCTGGAAGCCAACTGGGCAGCTTCACGGCAGCTGCTGGGAGCTAGTTTGTCCGTGTGGCTGGTGTTTGCAGAGGGATAGCCAGCAGAGGGATAGCCAGCAGAGGGATAGCCAGCAGAGGGATAGCCAGCAGAGGGATAGCCAGCAGAGGGATAGCCAGCAGAGGGACTAACGTGGCGGTGCGGCACCCTGGTCGTCTCCTCTAGTCCATGGTGGGGCCCAGTGGGAGACTGAGGTGGTGGTGGCTGGGCTGAGATGGAGAAGGCATCTGCTCCTGCCAGCAGCACCCGGCCCACCCTCCTCCGCAGGCTGTTGTTGCGCGAGAGGCTGTTGTTGCGTGAGAGGTTGTTGCGCGTGAGGCTGTTGCGTGAGAGCTCTCCCCCAGATCTGGACCCTTCCCTTCTAACACTCTGGTGCTTCAGGCACTCTGACTCCAGCTTGGCCACCATGTCTGACACCTTTACACATTCTGCCTCATCGGTCCCCTGGGGGTTCTGGTCTGGGGCTCTGGGCTGCTGAGGCTCCAGGGTCAGTGACAGCCCCCTGGTTAAGGTAATGCTTGTGGAGCTCCGCAGAGACACAGGCTTAGAGTCCACCTGCTTGTCGCTGGCTCTCTGCTCCAAGAAGGCCACCAACTCCACCACAGAGAGAGCCTTGTCAGTCCCACTCACCTCCTCACCCTCTACCctacacacctgctccccatccaCCCGTACAACCACCTCCCCACACTCAGGCACTCTGGGGCTCTCTCTGAGGCAGAGGGTCACCTCTACAGGGCTGTTCTCAGTGGGGCTCAGTGTCTCCAGGGCTCCGGATGACTGTCTCTCTCGGTCCTGGTGGTGCCCCTGAGACCCTGACCTCCTCCTGCGCTTGGCCACAGATCCACCCTCGTCCTCCCAGCAGCTCTTCATCTTCACAGACACGGTCCTCACCGGGCTGCTGCTCACCAAGTCCTCACCGGCCTCTCCATCGCCACCGTTCACCAGGCTTCCACGGCACTGGGGCGAGGCGAAGATGGCGATCTTCTCCTTGGTGTTGCCAGGCTTGATGACAGCCCAGATTTCCAGCggtccctctctgtcctccccttcaTAAGAGATTCTTAAGGAGGCCCCCTGGTTCTCAGAGCCTGTAGAAGAGGTGGTGCAGGTAGAGAGTAGCAGGGAGGGGGGGGTGTTGCAGGAGGTGGTCTTGGAGGTTTTACTCTGGGCCCAGGTGGCACTACTGTGGAATACATCCCCCTCGGACTCACTCAGCCTCGAGGTCTGCAGTCCACTGTCGCCGTGGTTATTATTACTGTTGTTGAGGTGGTTGGAGCCACTGTTGTCATTACTACAGCACTGCAGGGTGTTGGTGGATATGACACTGAGGGGGTAGCAGGCCGTACCCTGGCCTAGCCCGTTGCTTATCGGACCAATCAGGGCCACTGCTGGGCGCACCCCCCACACTGTCCTCTGTGACAGGACCCCCTGCTGGCTCACATGAAGGCCTCTCTGGCTGTCTTGACTGGACTCCAGGTAGATCTCTTTCTTCTGCAGTTTGGGGTGTTGCTTGAGATGCATGGCTG

Function

NR:

description
F-box only protein 34-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2256505 True 3989 TUCP 0.52 2 31614421 31618499

Neighbor

gene id symbol gene type direction distance location
LOC110505792 NA coding downstream 340455 31272049 ~ 31274777 (-)
LOC110504336 NA coding downstream 466353 31114868 ~ 31148068 (-)
LOC110505787 LOC106611255 coding downstream 525123 31087360 ~ 31089298 (-)
LOC110505783 LOC106611230 coding downstream 622332 30986765 ~ 30992089 (-)
LOC110505782 LOC106611229 coding downstream 628657 30913042 ~ 30985764 (-)
LOC110505798 LOC106611244 coding upstream 3543 31622042 ~ 31632417 (-)
LOC110504224 LOC106611245 coding upstream 14260 31632759 ~ 31636055 (-)
LOC110505800 LOC106611246 coding upstream 24249 31642748 ~ 31710036 (-)
LOC110505801 LOC106611247 coding upstream 94900 31713399 ~ 31741477 (-)
LOC110505802 LOC106611249 coding upstream 124315 31742814 ~ 31773610 (-)
G1973837 NA non-coding downstream 6773 31607439 ~ 31607648 (-)
G1973840 NA non-coding downstream 8487 31605688 ~ 31605934 (-)
G1973830 NA non-coding downstream 11436 31602780 ~ 31602985 (-)
G1973828 NA non-coding downstream 13064 31601077 ~ 31601357 (-)
G1973827 NA non-coding downstream 13530 31600625 ~ 31600891 (-)
G1973836 NA non-coding upstream 1284 31619783 ~ 31619980 (-)
G1973855 NA non-coding upstream 56455 31674954 ~ 31675316 (-)
G1973880 NA non-coding upstream 164666 31783165 ~ 31786895 (-)
G1973958 NA non-coding upstream 301915 31920414 ~ 31920621 (-)
G1973999 NA non-coding upstream 367438 31985937 ~ 31986379 (-)
G1973793 NA other downstream 29375 31584540 ~ 31585046 (-)
G1972851 NA other downstream 848488 30764956 ~ 30765933 (-)
G1972810 NA other downstream 931018 30616588 ~ 30683403 (-)
G1972746 npas3 other downstream 1106363 30507551 ~ 30508058 (-)
G1972454 NA other downstream 1631521 29982284 ~ 29982900 (-)
G1974000 NA other upstream 367944 31986443 ~ 31986884 (-)
G1975453 NA other upstream 1701230 33319729 ~ 33324325 (-)
G1975763 NA other upstream 1937931 33556430 ~ 33556811 (-)
G1977046 NA other upstream 2859121 34477620 ~ 34478809 (-)
G1977226 NA other upstream 3256886 34875385 ~ 34876181 (-)

Expression


Co-expression Network