G1973740


Basic Information

Item Value
gene id G1973740
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 31924014 ~ 31924219 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2256388
AAAATCCCTAactgaaaaacagttttttagttTTCCCCCCACACAATTAAAATCACAAAACATTATTTTCGTTGTTATAGTAGACATGCTATAAAGGGCCTGGGAAAGTCAAATAAAACCAGAGCGGAAGAGGTGAATTTGAAAGCTACTTGGTGAATTTGCAAGCCAAGACAATGAGAGATGCAGATTACCAAAACATATGAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2256388 True 206 lncRNA 0.36 1 31924014 31924219

Neighbor

gene id symbol gene type direction distance location
LOC110505805 LOC106602325 coding upstream 13656 31807487 ~ 31910358 (+)
trnaa-ugc-181 NA coding upstream 233739 31690200 ~ 31690275 (+)
LOC118944345 NA coding upstream 281268 31640296 ~ 31642746 (+)
LOC110505797 LOC106611243 coding upstream 305489 31589889 ~ 31618525 (+)
LOC110505796 leg3 coding upstream 336382 31576483 ~ 31587632 (+)
LOC110504226 LOC100195551 coding downstream 10513 31934732 ~ 31977371 (+)
LOC110510947 LOC106611254 coding downstream 97053 32021272 ~ 32135673 (+)
LOC118944263 NA coding downstream 1200348 33124567 ~ 33142910 (+)
LOC110504337 NA coding downstream 1358767 33282986 ~ 33288608 (+)
dnal1 dnal1 coding downstream 2522482 34446701 ~ 34452841 (+)
G1973721 NA non-coding upstream 5132 31889716 ~ 31918882 (+)
G1973670 NA non-coding upstream 137096 31784699 ~ 31786918 (+)
G1973652 NA non-coding upstream 148123 31773692 ~ 31775891 (+)
G1973646 NA non-coding upstream 182497 31740843 ~ 31741517 (+)
G1973649 LOC106611247 non-coding upstream 190342 31731661 ~ 31733672 (+)
G1973744 NA non-coding downstream 8143 31932362 ~ 31932579 (+)
G1973746 NA non-coding downstream 9816 31934035 ~ 31934460 (+)
G1973989 NA non-coding downstream 54820 31979039 ~ 31979248 (+)
G1973998 NA non-coding downstream 60512 31984731 ~ 31984964 (+)
G1973717 NA other upstream 43194 31880110 ~ 31880820 (+)
G1973669 NA other upstream 134565 31787245 ~ 31789449 (+)
G1973635 NA other upstream 205046 31718524 ~ 31718968 (+)
G1973369 NA other upstream 536278 31387478 ~ 31387736 (+)
G1974049 NA other downstream 149773 32073992 ~ 32074761 (+)
G1974953 NA other downstream 979907 32904126 ~ 32905975 (+)
G1976029 LOC106611270 other downstream 1862785 33787004 ~ 33788129 (+)
G1976067 NA other downstream 1911894 33836113 ~ 33840078 (+)

Expression


Co-expression Network