Gene
RNA
| Item | Value |
|---|---|
| gene id | G1975743 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 33534473 ~ 33536919 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: E3 ubiquitin-protein ligase UBR4 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2258556 | True | 305 | lncRNA | 0.40 | 3 | 33534473 | 33536919 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505810 | LOC106611272 | coding | downstream | 305198 | 33187619 ~ 33229275 (-) |
| LOC110504227 | galc | coding | downstream | 460941 | 33040661 ~ 33073532 (-) |
| LOC110505809 | vrk1 | coding | downstream | 583582 | 32925867 ~ 32950891 (-) |
| LOC118944262 | NA | coding | downstream | 1242626 | 32274667 ~ 32291847 (-) |
| LOC118944338 | NA | coding | downstream | 1351160 | 32179724 ~ 32183313 (-) |
| LOC118944264 | NA | coding | upstream | 135155 | 33672074 ~ 33675022 (-) |
| LOC110505811 | LOC106611271 | coding | upstream | 158694 | 33695613 ~ 33698107 (-) |
| LOC100136218 | LOC106611270 | coding | upstream | 227401 | 33764320 ~ 33829181 (-) |
| LOC118944291 | NA | coding | upstream | 300479 | 33837398 ~ 33838849 (-) |
| LOC110505812 | LOC106611269 | coding | upstream | 302915 | 33839834 ~ 33888222 (-) |
| G1975542 | NA | non-coding | downstream | 134807 | 33399413 ~ 33399666 (-) |
| G1975520 | NA | non-coding | downstream | 153246 | 33380960 ~ 33381227 (-) |
| G1975439 | NA | non-coding | downstream | 232665 | 33301540 ~ 33301808 (-) |
| G1975421 | NA | non-coding | downstream | 252664 | 33281409 ~ 33281809 (-) |
| G1975381 | NA | non-coding | downstream | 262048 | 33272113 ~ 33272425 (-) |
| G1975761 | NA | non-coding | upstream | 17781 | 33554700 ~ 33554931 (-) |
| G1975773 | NA | non-coding | upstream | 26422 | 33563341 ~ 33563555 (-) |
| G1975774 | NA | non-coding | upstream | 26674 | 33563593 ~ 33563815 (-) |
| G1975776 | NA | non-coding | upstream | 27169 | 33564088 ~ 33564298 (-) |
| G1975847 | NA | non-coding | upstream | 85052 | 33621971 ~ 33622276 (-) |
| G1975453 | NA | other | downstream | 210148 | 33319729 ~ 33324325 (-) |
| G1974000 | NA | other | downstream | 1547589 | 31986443 ~ 31986884 (-) |
| G1973835 | LOC106611243 | other | downstream | 1915974 | 31614421 ~ 31618499 (-) |
| G1973793 | NA | other | downstream | 1949427 | 31584540 ~ 31585046 (-) |
| G1972851 | NA | other | downstream | 2768540 | 30764956 ~ 30765933 (-) |
| G1975763 | NA | other | upstream | 19511 | 33556430 ~ 33556811 (-) |
| G1977046 | NA | other | upstream | 940701 | 34477620 ~ 34478809 (-) |
| G1977226 | NA | other | upstream | 1338466 | 34875385 ~ 34876181 (-) |
| LOC110505829 | LOC106611279 | other | upstream | 1433233 | 34970065 ~ 35000444 (-) |
| G1977346 | NA | other | upstream | 1490181 | 35027100 ~ 35100978 (-) |
