G1975998



Basic Information


Item Value
gene id G1975998
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 33751436 ~ 33751669 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2258819
GGAGtgagtcccaaattgcaccctattccctatatagtgccctacatttgaccagagccctatgggtgtcATTTAAGACTCACGATAGGCTACGTCTCTATGCTGCAGTCTACTCTGTGGTGTTATCCAAGGGCAGTGTGATTTGTTGAAAGGGCTGTGTGTGGGAATGAGAGGGTTATAGAGACTTATTACCTGTGTTGACAATGTGCAGGCTCTCGCCGCGTCATCTGACCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2258819 True 234 lncRNA 0.49 1 33751436 33751669

Neighbor


gene id symbol gene type direction distance location
LOC110505811 LOC106611271 coding downstream 53329 33695613 ~ 33698107 (-)
LOC118944264 NA coding downstream 76414 33672074 ~ 33675022 (-)
LOC110505810 LOC106611272 coding downstream 522161 33187619 ~ 33229275 (-)
LOC110504227 galc coding downstream 677904 33040661 ~ 33073532 (-)
LOC110505809 vrk1 coding downstream 800545 32925867 ~ 32950891 (-)
LOC100136218 LOC106611270 coding upstream 12651 33764320 ~ 33829181 (-)
LOC118944291 NA coding upstream 85729 33837398 ~ 33838849 (-)
LOC110505812 LOC106611269 coding upstream 88165 33839834 ~ 33888222 (-)
LOC110505813 LOC106611262 coding upstream 179996 33931665 ~ 33981041 (-)
LOC110505815 LOC106611267 coding upstream 238328 33989997 ~ 34016972 (-)
G1975900 NA non-coding downstream 86777 33664164 ~ 33664659 (-)
G1975879 NA non-coding downstream 101252 33649954 ~ 33650184 (-)
G1975877 NA non-coding downstream 102363 33648801 ~ 33649073 (-)
G1975847 NA non-coding downstream 129160 33621971 ~ 33622276 (-)
G1975776 NA non-coding downstream 187138 33564088 ~ 33564298 (-)
G1976137 NA non-coding upstream 96845 33848514 ~ 33848892 (-)
G1976172 NA non-coding upstream 151865 33903534 ~ 33908448 (-)
G1976174 NA non-coding upstream 153158 33904827 ~ 33909698 (-)
G1976256 NA non-coding upstream 229694 33981363 ~ 33982345 (-)
G1976257 NA non-coding upstream 230768 33982437 ~ 33988957 (-)
G1975763 NA other downstream 194625 33556430 ~ 33556811 (-)
G1975453 NA other downstream 427111 33319729 ~ 33324325 (-)
G1974000 NA other downstream 1764552 31986443 ~ 31986884 (-)
G1973835 LOC106611243 other downstream 2132937 31614421 ~ 31618499 (-)
G1973793 NA other downstream 2166390 31584540 ~ 31585046 (-)
G1977046 NA other upstream 725951 34477620 ~ 34478809 (-)
G1977226 NA other upstream 1123716 34875385 ~ 34876181 (-)
LOC110505829 LOC106611279 other upstream 1218483 34970065 ~ 35000444 (-)
G1977346 NA other upstream 1275431 35027100 ~ 35100978 (-)
G1977392 NA other upstream 1301381 35053050 ~ 35056926 (-)

Expression



Co-expression Network