G1976058


Basic Information

Item Value
gene id G1976058
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 33820193 ~ 33820718 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2258881
atttattggatatttcaaacgtttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattatagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgaaatgttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgctgaagaaaagcaggcccaaaccat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2258881 True 344 lncRNA 0.41 2 33820193 33820718

Neighbor

gene id symbol gene type direction distance location
LOC110504337 NA coding upstream 531585 33282986 ~ 33288608 (+)
LOC118944263 NA coding upstream 677283 33124567 ~ 33142910 (+)
LOC110510947 LOC106611254 coding upstream 1684520 32021272 ~ 32135673 (+)
LOC110504226 LOC100195551 coding upstream 1842822 31934732 ~ 31977371 (+)
LOC110505805 LOC106602325 coding upstream 1909835 31807487 ~ 31910358 (+)
dnal1 dnal1 coding downstream 625983 34446701 ~ 34452841 (+)
tedc1 LOC106611146 coding downstream 636797 34457515 ~ 34477147 (+)
tmem121aa LOC106602575 coding downstream 861014 34681732 ~ 34685739 (+)
LOC110505824 snap23 coding downstream 930166 34750884 ~ 34771020 (+)
LOC110505830 LOC106611281 coding downstream 1191977 35012695 ~ 35056944 (+)
G1976003 NA non-coding upstream 62340 33757632 ~ 33757853 (+)
G1976000 NA non-coding upstream 67236 33752721 ~ 33752957 (+)
G1975951 NA non-coding upstream 83554 33730665 ~ 33736639 (+)
G1975926 NA non-coding upstream 127752 33692145 ~ 33692441 (+)
G1975893 NA non-coding upstream 160245 33659714 ~ 33659948 (+)
G1976067 NA non-coding downstream 16191 33836113 ~ 33840078 (+)
G1976101 NA non-coding downstream 76429 33897147 ~ 33897363 (+)
G1976102 NA non-coding downstream 77177 33897895 ~ 33898285 (+)
G1976106 NA non-coding downstream 87009 33907727 ~ 33912767 (+)
G1976109 NA non-coding downstream 94478 33915196 ~ 33915435 (+)
G1976029 LOC106611270 other upstream 32064 33787004 ~ 33788129 (+)
G1974953 NA other upstream 914218 32904126 ~ 32905975 (+)
G1974049 NA other upstream 1745432 32073992 ~ 32074761 (+)
G1976573 LOC100194703 other downstream 659312 34480030 ~ 34480897 (+)
G1976574 LOC100194703 other downstream 660186 34480904 ~ 34481279 (+)
G1976575 NA other downstream 660801 34481519 ~ 34481921 (+)

Expression


Co-expression Network