Gene
RNA
| Item | Value |
|---|---|
| gene id | G1976172 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 33903534 ~ 33908448 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: protein LDOC1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2259035 | True | 263 | lncRNA | 0.51 | 2 | 33903534 | 33908448 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505812 | LOC106611269 | coding | downstream | 15312 | 33839834 ~ 33888222 (-) |
| LOC118944291 | NA | coding | downstream | 64685 | 33837398 ~ 33838849 (-) |
| LOC100136218 | LOC106611270 | coding | downstream | 74353 | 33764320 ~ 33829181 (-) |
| LOC110505811 | LOC106611271 | coding | downstream | 205427 | 33695613 ~ 33698107 (-) |
| LOC118944264 | NA | coding | downstream | 228512 | 33672074 ~ 33675022 (-) |
| LOC110505813 | LOC106611262 | coding | upstream | 23217 | 33931665 ~ 33981041 (-) |
| LOC110505815 | LOC106611267 | coding | upstream | 81549 | 33989997 ~ 34016972 (-) |
| LOC110504228 | NA | coding | upstream | 145103 | 34053551 ~ 34059575 (-) |
| eif2s1a | if2a | coding | upstream | 160708 | 34069156 ~ 34072609 (-) |
| mpp5a | LOC106611266 | coding | upstream | 164766 | 34073214 ~ 34117847 (-) |
| G1976137 | NA | non-coding | downstream | 54642 | 33848514 ~ 33848892 (-) |
| G1975998 | NA | non-coding | downstream | 151865 | 33751436 ~ 33751669 (-) |
| G1975900 | NA | non-coding | downstream | 238875 | 33664164 ~ 33664659 (-) |
| G1975879 | NA | non-coding | downstream | 253350 | 33649954 ~ 33650184 (-) |
| G1975877 | NA | non-coding | downstream | 254461 | 33648801 ~ 33649073 (-) |
| G1976256 | NA | non-coding | upstream | 72915 | 33981363 ~ 33982345 (-) |
| G1976257 | NA | non-coding | upstream | 73989 | 33982437 ~ 33988957 (-) |
| G1976307 | NA | non-coding | upstream | 141478 | 34049926 ~ 34050169 (-) |
| G1976331 | NA | non-coding | upstream | 155471 | 34063919 ~ 34064216 (-) |
| G1976333 | NA | non-coding | upstream | 156251 | 34064699 ~ 34065929 (-) |
| G1975763 | NA | other | downstream | 346723 | 33556430 ~ 33556811 (-) |
| G1975453 | NA | other | downstream | 579209 | 33319729 ~ 33324325 (-) |
| G1974000 | NA | other | downstream | 1916650 | 31986443 ~ 31986884 (-) |
| G1973835 | LOC106611243 | other | downstream | 2285035 | 31614421 ~ 31618499 (-) |
| G1973793 | NA | other | downstream | 2318488 | 31584540 ~ 31585046 (-) |
| G1977046 | NA | other | upstream | 569172 | 34477620 ~ 34478809 (-) |
| G1977226 | NA | other | upstream | 966937 | 34875385 ~ 34876181 (-) |
| LOC110505829 | LOC106611279 | other | upstream | 1061704 | 34970065 ~ 35000444 (-) |
| G1977346 | NA | other | upstream | 1118652 | 35027100 ~ 35100978 (-) |
| G1977392 | NA | other | upstream | 1144602 | 35053050 ~ 35056926 (-) |
