G1976109


Basic Information

Item Value
gene id G1976109
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 33915196 ~ 33915435 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2258953
atactgttatttactgatGTGCCtcatctcttacaaaagctttccagaacatgcaaactgctttttatactgttcaacatactttgtgtcaattgaagcttatcctcaatactgagaaaactaaactaatggtgttttctaatgcaagaaaCAGAcgtctgaacctttcacctattactacctgtcagggcaaggagattgaggttgtaaactcatataaatatcttggaattttaattg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2258953 True 240 lncRNA 0.34 1 33915196 33915435

Neighbor

gene id symbol gene type direction distance location
LOC110504337 NA coding upstream 626588 33282986 ~ 33288608 (+)
LOC118944263 NA coding upstream 772286 33124567 ~ 33142910 (+)
LOC110510947 LOC106611254 coding upstream 1779523 32021272 ~ 32135673 (+)
LOC110504226 LOC100195551 coding upstream 1937825 31934732 ~ 31977371 (+)
LOC110505805 LOC106602325 coding upstream 2004838 31807487 ~ 31910358 (+)
dnal1 dnal1 coding downstream 531266 34446701 ~ 34452841 (+)
tedc1 LOC106611146 coding downstream 542080 34457515 ~ 34477147 (+)
tmem121aa LOC106602575 coding downstream 766297 34681732 ~ 34685739 (+)
LOC110505824 snap23 coding downstream 835449 34750884 ~ 34771020 (+)
LOC110505830 LOC106611281 coding downstream 1097260 35012695 ~ 35056944 (+)
G1976106 NA non-coding upstream 2429 33907727 ~ 33912767 (+)
G1976102 NA non-coding upstream 16911 33897895 ~ 33898285 (+)
G1976101 NA non-coding upstream 17833 33897147 ~ 33897363 (+)
G1976067 NA non-coding upstream 75118 33836113 ~ 33840078 (+)
G1976058 NA non-coding upstream 94478 33820193 ~ 33820718 (+)
G1976184 NA non-coding downstream 12246 33927681 ~ 33932054 (+)
G1976185 NA non-coding downstream 27692 33943127 ~ 33943900 (+)
G1976201 LOC106611262 non-coding downstream 49224 33964659 ~ 33965088 (+)
G1976217 NA non-coding downstream 61321 33976756 ~ 33977881 (+)
G1976212 NA non-coding downstream 66034 33981469 ~ 33982302 (+)
G1976029 LOC106611270 other upstream 127067 33787004 ~ 33788129 (+)
G1974953 NA other upstream 1009221 32904126 ~ 32905975 (+)
G1974049 NA other upstream 1840435 32073992 ~ 32074761 (+)
G1976573 LOC100194703 other downstream 564595 34480030 ~ 34480897 (+)
G1976574 LOC100194703 other downstream 565469 34480904 ~ 34481279 (+)
G1976575 NA other downstream 566084 34481519 ~ 34481921 (+)
G1976680 NA other downstream 786545 34701980 ~ 34703894 (+)

Expression


Co-expression Network