G1976201 (LOC106611262)


Basic Information

Item Value
gene id G1976201
gene name LOC106611262
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 33964659 ~ 33965088 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2259080
CCTCCACTGCCCAACCATCTGTTCCTCaatcctgtctccctccctggctGTTTCCAGATCTCCggtcctgtctccctccctggctGTCTCCAGATCTCCggtcctgtctccctccctggctGTCTCCAGGTCTCTGGTCAGTCTGTGGAGCAGGCCCCGGAGCTGGCCGATGTCCTCCCCTAGACGCTGGCAGCGGCTCTGGTACTGGCTCTGAGACTCCAGGCTGCTCTTCAGGCTCTCTCCGGCCTCACAcaggctctgtctcagcctcTGCCAGTCCAGACGCAGCTCCTCTGCTTCCTCCACCACCACATCTGCCCCCCCGGGGGACGTGTTGGCCCGCACTGCCTCCGCCATGACCTCAATGTGCTGCAGCGTCCTCTCCTCACTGGCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2259080 True 394 lncRNA 0.64 2 33964659 33965088

Neighbor

gene id symbol gene type direction distance location
LOC110504337 NA coding upstream 676051 33282986 ~ 33288608 (+)
LOC118944263 NA coding upstream 821749 33124567 ~ 33142910 (+)
LOC110510947 LOC106611254 coding upstream 1828986 32021272 ~ 32135673 (+)
LOC110504226 LOC100195551 coding upstream 1987288 31934732 ~ 31977371 (+)
LOC110505805 LOC106602325 coding upstream 2054301 31807487 ~ 31910358 (+)
dnal1 dnal1 coding downstream 481613 34446701 ~ 34452841 (+)
tedc1 LOC106611146 coding downstream 492427 34457515 ~ 34477147 (+)
tmem121aa LOC106602575 coding downstream 716644 34681732 ~ 34685739 (+)
LOC110505824 snap23 coding downstream 785796 34750884 ~ 34771020 (+)
LOC110505830 LOC106611281 coding downstream 1047607 35012695 ~ 35056944 (+)
G1976185 NA non-coding upstream 20759 33943127 ~ 33943900 (+)
G1976184 NA non-coding upstream 32605 33927681 ~ 33932054 (+)
G1976109 NA non-coding upstream 49224 33915196 ~ 33915435 (+)
G1976106 NA non-coding upstream 51892 33907727 ~ 33912767 (+)
G1976102 NA non-coding upstream 66374 33897895 ~ 33898285 (+)
G1976217 NA non-coding downstream 11668 33976756 ~ 33977881 (+)
G1976212 NA non-coding downstream 16381 33981469 ~ 33982302 (+)
G1976252 NA non-coding downstream 85173 34050261 ~ 34050490 (+)
G1976314 NA non-coding downstream 89416 34054504 ~ 34054791 (+)
G1976334 NA non-coding downstream 101198 34066286 ~ 34066520 (+)
G1976067 NA other upstream 124581 33836113 ~ 33840078 (+)
G1976029 LOC106611270 other upstream 176530 33787004 ~ 33788129 (+)
G1974953 NA other upstream 1058684 32904126 ~ 32905975 (+)
G1974049 NA other upstream 1889898 32073992 ~ 32074761 (+)
G1976573 LOC100194703 other downstream 514942 34480030 ~ 34480897 (+)
G1976574 LOC100194703 other downstream 515816 34480904 ~ 34481279 (+)
G1976575 NA other downstream 516431 34481519 ~ 34481921 (+)
G1976680 NA other downstream 736892 34701980 ~ 34703894 (+)

Expression


Co-expression Network