G1976217


Basic Information

Item Value
gene id G1976217
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 33976756 ~ 33977881 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2259097
AGTGAGACCCAACCCTAACTAAGTACTGACACAGgctcagagagacagggtgagaccCAACCCTAACTAAGTACTGACTAAggctcagagagacagtgagacccaaccctaactaactactgacaggctcagagagacagggtgagaccCAACCCTAACGAACTACTGACAggctcagagagacagtgagacccaaccctaactaacaactgacaggctcagagagacagtgagacccaACCCTAACGAACTACTGACAggctcagagagacagtgagacccaACCCTAACGAACTACTGACAGgctcagagagacagggtgagacccaaccctaactaagtactgacaggctcagagagacagtgagacccaaccctaactaagtactgacaggctcagagaaacagggtgagacccaactctgtctctctgagcctgtgtcagtagtagttagtagtgtcAGGAGTAGTTAGTAGTGtcagtagtagTTAGTAGTGtcagtAGTAGTTAGTAGTGTCAGGAGTAGTTAGTAGTGTCAGTAGTAGTTAGTGGTGtcagtagtagttagtagtgtcAGGAGTAGTTAGTAGTGTCAGTGGTTGGTTGTGTCAGTGGTTGGTTGTATCAGTGGTTGGTTGTGTCAGTGGCTGGTTGTGTCAGTGGTTGGTTGTGTCAGTAGTTGGTTGTGTCAGTAGTTGTTTAGGGTTGGGtctcacctctgtctctctgagtctggcCTCCAGGGCGGCCCGGGGACCCTGGGTGTTGTCGTTGAGCCGGAGCCGCTCCTGGACGGCCTTCATCCAGGACATAGCTGCCTCCAGGCTCTCCCTAAACAGGATCTCCTGCTGCTCCTGATGAGTCATCTGCACACACCA

Function

NR:

description
PREDICTED: nesprin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2259097 True 879 lncRNA 0.51 3 33976756 33977881

Neighbor

gene id symbol gene type direction distance location
LOC110504337 NA coding upstream 688148 33282986 ~ 33288608 (+)
LOC118944263 NA coding upstream 833846 33124567 ~ 33142910 (+)
LOC110510947 LOC106611254 coding upstream 1841083 32021272 ~ 32135673 (+)
LOC110504226 LOC100195551 coding upstream 1999385 31934732 ~ 31977371 (+)
LOC110505805 LOC106602325 coding upstream 2066398 31807487 ~ 31910358 (+)
dnal1 dnal1 coding downstream 468820 34446701 ~ 34452841 (+)
tedc1 LOC106611146 coding downstream 479634 34457515 ~ 34477147 (+)
tmem121aa LOC106602575 coding downstream 703851 34681732 ~ 34685739 (+)
LOC110505824 snap23 coding downstream 773003 34750884 ~ 34771020 (+)
LOC110505830 LOC106611281 coding downstream 1034814 35012695 ~ 35056944 (+)
G1976201 LOC106611262 non-coding upstream 11668 33964659 ~ 33965088 (+)
G1976185 NA non-coding upstream 32856 33943127 ~ 33943900 (+)
G1976184 NA non-coding upstream 44702 33927681 ~ 33932054 (+)
G1976109 NA non-coding upstream 61321 33915196 ~ 33915435 (+)
G1976106 NA non-coding upstream 63989 33907727 ~ 33912767 (+)
G1976212 NA non-coding downstream 3588 33981469 ~ 33982302 (+)
G1976252 NA non-coding downstream 72380 34050261 ~ 34050490 (+)
G1976314 NA non-coding downstream 76623 34054504 ~ 34054791 (+)
G1976334 NA non-coding downstream 88405 34066286 ~ 34066520 (+)
G1976338 NA non-coding downstream 99426 34077307 ~ 34084834 (+)
G1976067 NA other upstream 136678 33836113 ~ 33840078 (+)
G1976029 LOC106611270 other upstream 188627 33787004 ~ 33788129 (+)
G1974953 NA other upstream 1070781 32904126 ~ 32905975 (+)
G1974049 NA other upstream 1901995 32073992 ~ 32074761 (+)
G1976573 LOC100194703 other downstream 502149 34480030 ~ 34480897 (+)
G1976574 LOC100194703 other downstream 503023 34480904 ~ 34481279 (+)
G1976575 NA other downstream 503638 34481519 ~ 34481921 (+)
G1976680 NA other downstream 724099 34701980 ~ 34703894 (+)

Expression


Co-expression Network