Gene
RNA
| Item | Value |
|---|---|
| gene id | G1976307 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 34049926 ~ 34050169 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2259197 | True | 244 | lncRNA | 0.47 | 1 | 34049926 | 34050169 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505815 | LOC106611267 | coding | downstream | 32954 | 33989997 ~ 34016972 (-) |
| LOC110505813 | LOC106611262 | coding | downstream | 68885 | 33931665 ~ 33981041 (-) |
| LOC110505812 | LOC106611269 | coding | downstream | 161704 | 33839834 ~ 33888222 (-) |
| LOC118944291 | NA | coding | downstream | 211077 | 33837398 ~ 33838849 (-) |
| LOC100136218 | LOC106611270 | coding | downstream | 220745 | 33764320 ~ 33829181 (-) |
| LOC110504228 | NA | coding | upstream | 3382 | 34053551 ~ 34059575 (-) |
| eif2s1a | if2a | coding | upstream | 18987 | 34069156 ~ 34072609 (-) |
| mpp5a | LOC106611266 | coding | upstream | 23045 | 34073214 ~ 34117847 (-) |
| gphna | LOC106611263 | coding | upstream | 68007 | 34118176 ~ 34235545 (-) |
| LOC118944181 | NA | coding | upstream | 117291 | 34167460 ~ 34168258 (-) |
| G1976257 | NA | non-coding | downstream | 60969 | 33982437 ~ 33988957 (-) |
| G1976256 | NA | non-coding | downstream | 67581 | 33981363 ~ 33982345 (-) |
| G1976174 | NA | non-coding | downstream | 140228 | 33904827 ~ 33909698 (-) |
| G1976172 | NA | non-coding | downstream | 141478 | 33903534 ~ 33908448 (-) |
| G1976137 | NA | non-coding | downstream | 201034 | 33848514 ~ 33848892 (-) |
| G1976331 | NA | non-coding | upstream | 13750 | 34063919 ~ 34064216 (-) |
| G1976333 | NA | non-coding | upstream | 14530 | 34064699 ~ 34065929 (-) |
| G1976821 | NA | non-coding | upstream | 18111 | 34068280 ~ 34068460 (-) |
| G1976857 | NA | non-coding | upstream | 94278 | 34144447 ~ 34145605 (-) |
| G1976866 | NA | non-coding | upstream | 116452 | 34166621 ~ 34167074 (-) |
| G1975763 | NA | other | downstream | 493115 | 33556430 ~ 33556811 (-) |
| G1975453 | NA | other | downstream | 725601 | 33319729 ~ 33324325 (-) |
| G1974000 | NA | other | downstream | 2063042 | 31986443 ~ 31986884 (-) |
| G1973835 | LOC106611243 | other | downstream | 2431427 | 31614421 ~ 31618499 (-) |
| G1973793 | NA | other | downstream | 2464880 | 31584540 ~ 31585046 (-) |
| G1977046 | NA | other | upstream | 427451 | 34477620 ~ 34478809 (-) |
| G1977226 | NA | other | upstream | 825216 | 34875385 ~ 34876181 (-) |
| LOC110505829 | LOC106611279 | other | upstream | 919983 | 34970065 ~ 35000444 (-) |
| G1977346 | NA | other | upstream | 976931 | 35027100 ~ 35100978 (-) |
| G1977392 | NA | other | upstream | 1002881 | 35053050 ~ 35056926 (-) |
