Gene
RNA
| Item | Value |
|---|---|
| gene id | G1976897 |
| gene name | LOC106585398 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 34227858 ~ 34228499 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger BED domain-containing protein 4-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2259878 | True | 514 | lncRNA | 0.51 | 2 | 34227858 | 34228499 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944181 | NA | coding | downstream | 59600 | 34167460 ~ 34168258 (-) |
| mpp5a | LOC106611266 | coding | downstream | 110011 | 34073214 ~ 34117847 (-) |
| eif2s1a | if2a | coding | downstream | 155249 | 34069156 ~ 34072609 (-) |
| LOC110504228 | NA | coding | downstream | 168283 | 34053551 ~ 34059575 (-) |
| LOC110505815 | LOC106611267 | coding | downstream | 210886 | 33989997 ~ 34016972 (-) |
| LOC110504230 | LOC106611223 | coding | upstream | 63969 | 34292468 ~ 34442343 (-) |
| pth2 | NA | coding | upstream | 470670 | 34699169 ~ 34700207 (-) |
| rin3 | LOC106611275 | coding | upstream | 487229 | 34715728 ~ 34739802 (-) |
| LOC110505825 | LOC106611276 | coding | upstream | 546385 | 34774884 ~ 34893972 (-) |
| LOC110504231 | LOC106611278 | coding | upstream | 669077 | 34897576 ~ 34912793 (-) |
| G1976896 | NA | non-coding | downstream | 223 | 34226704 ~ 34227635 (-) |
| G1976872 | NA | non-coding | downstream | 45988 | 34181243 ~ 34181870 (-) |
| G1976866 | NA | non-coding | downstream | 60784 | 34166621 ~ 34167074 (-) |
| G1976857 | NA | non-coding | downstream | 82253 | 34144447 ~ 34145605 (-) |
| G1976821 | NA | non-coding | downstream | 159398 | 34068280 ~ 34068460 (-) |
| G1976901 | NA | non-coding | upstream | 11503 | 34240002 ~ 34246788 (-) |
| G1976915 | NA | non-coding | upstream | 37551 | 34266050 ~ 34266253 (-) |
| G1976932 | NA | non-coding | upstream | 59890 | 34288389 ~ 34288718 (-) |
| G1977027 | NA | non-coding | upstream | 217280 | 34445779 ~ 34446335 (-) |
| G1975763 | NA | other | downstream | 671047 | 33556430 ~ 33556811 (-) |
| G1975453 | NA | other | downstream | 903533 | 33319729 ~ 33324325 (-) |
| G1974000 | NA | other | downstream | 2240974 | 31986443 ~ 31986884 (-) |
| G1973835 | LOC106611243 | other | downstream | 2609359 | 31614421 ~ 31618499 (-) |
| G1973793 | NA | other | downstream | 2642812 | 31584540 ~ 31585046 (-) |
| G1977046 | NA | other | upstream | 249121 | 34477620 ~ 34478809 (-) |
| G1977226 | NA | other | upstream | 646886 | 34875385 ~ 34876181 (-) |
| LOC110505829 | LOC106611279 | other | upstream | 741653 | 34970065 ~ 35000444 (-) |
| G1977346 | NA | other | upstream | 798601 | 35027100 ~ 35100978 (-) |
| G1977392 | NA | other | upstream | 824551 | 35053050 ~ 35056926 (-) |
