Gene
RNA
| Item | Value |
|---|---|
| gene id | G1977027 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 34445779 ~ 34446335 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2260044 | True | 557 | lncRNA | 0.34 | 1 | 34445779 | 34446335 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504230 | LOC106611223 | coding | downstream | 3436 | 34292468 ~ 34442343 (-) |
| gphna | LOC106611263 | coding | downstream | 210234 | 34118176 ~ 34235545 (-) |
| LOC118944181 | NA | coding | downstream | 277521 | 34167460 ~ 34168258 (-) |
| mpp5a | LOC106611266 | coding | downstream | 327932 | 34073214 ~ 34117847 (-) |
| eif2s1a | if2a | coding | downstream | 373170 | 34069156 ~ 34072609 (-) |
| pth2 | NA | coding | upstream | 252834 | 34699169 ~ 34700207 (-) |
| rin3 | LOC106611275 | coding | upstream | 269393 | 34715728 ~ 34739802 (-) |
| LOC110505825 | LOC106611276 | coding | upstream | 328549 | 34774884 ~ 34893972 (-) |
| LOC110504231 | LOC106611278 | coding | upstream | 451241 | 34897576 ~ 34912793 (-) |
| LOC118944354 | LOC106611278 | coding | upstream | 466575 | 34912910 ~ 34950168 (-) |
| G1976932 | NA | non-coding | downstream | 157061 | 34288389 ~ 34288718 (-) |
| G1976915 | NA | non-coding | downstream | 179526 | 34266050 ~ 34266253 (-) |
| G1976901 | NA | non-coding | downstream | 198991 | 34240002 ~ 34246788 (-) |
| G1976897 | LOC106585398 | non-coding | downstream | 217280 | 34227858 ~ 34228499 (-) |
| G1977030 | NA | non-coding | upstream | 7979 | 34454314 ~ 34455801 (-) |
| G1977046 | NA | non-coding | upstream | 31790 | 34477620 ~ 34478809 (-) |
| G1977048 | NA | non-coding | upstream | 32878 | 34479213 ~ 34479649 (-) |
| G1977049 | NA | non-coding | upstream | 33704 | 34480039 ~ 34480322 (-) |
| G1977050 | LOC100194703 | non-coding | upstream | 34316 | 34480651 ~ 34481106 (-) |
| G1975763 | NA | other | downstream | 888968 | 33556430 ~ 33556811 (-) |
| G1975453 | NA | other | downstream | 1121454 | 33319729 ~ 33324325 (-) |
| G1974000 | NA | other | downstream | 2458895 | 31986443 ~ 31986884 (-) |
| G1973835 | LOC106611243 | other | downstream | 2827280 | 31614421 ~ 31618499 (-) |
| G1973793 | NA | other | downstream | 2860733 | 31584540 ~ 31585046 (-) |
| G1977226 | NA | other | upstream | 429050 | 34875385 ~ 34876181 (-) |
| LOC110505829 | LOC106611279 | other | upstream | 523817 | 34970065 ~ 35000444 (-) |
| G1977346 | NA | other | upstream | 580765 | 35027100 ~ 35100978 (-) |
| G1977392 | NA | other | upstream | 606715 | 35053050 ~ 35056926 (-) |
