Gene
RNA
| Item | Value |
|---|---|
| gene id | G1977030 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 34454314 ~ 34455801 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2260053 | False | 996 | lncRNA | 0.46 | 3 | 34454314 | 34455751 |
| TU2260054 | True | 882 | lncRNA | 0.43 | 3 | 34454314 | 34455801 |
34,452,800
34,453,200
34,453,600
34,454,000
34,454,400
34,454,800
34,455,200
34,455,600
34,456,000
34,456,400
34,456,800
34,457,200
34,457,600
34,458,000
34,458,400
34,458,800
34,459,200
34,459,600
NC_048589.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504230 | LOC106611223 | coding | downstream | 11971 | 34292468 ~ 34442343 (-) |
| gphna | LOC106611263 | coding | downstream | 218769 | 34118176 ~ 34235545 (-) |
| LOC118944181 | NA | coding | downstream | 286056 | 34167460 ~ 34168258 (-) |
| mpp5a | LOC106611266 | coding | downstream | 336467 | 34073214 ~ 34117847 (-) |
| eif2s1a | if2a | coding | downstream | 381705 | 34069156 ~ 34072609 (-) |
| pth2 | NA | coding | upstream | 243368 | 34699169 ~ 34700207 (-) |
| rin3 | LOC106611275 | coding | upstream | 259927 | 34715728 ~ 34739802 (-) |
| LOC110505825 | LOC106611276 | coding | upstream | 319083 | 34774884 ~ 34893972 (-) |
| LOC110504231 | LOC106611278 | coding | upstream | 441775 | 34897576 ~ 34912793 (-) |
| LOC118944354 | LOC106611278 | coding | upstream | 457109 | 34912910 ~ 34950168 (-) |
| G1977027 | NA | non-coding | downstream | 7979 | 34445779 ~ 34446335 (-) |
| G1976932 | NA | non-coding | downstream | 165596 | 34288389 ~ 34288718 (-) |
| G1976915 | NA | non-coding | downstream | 188061 | 34266050 ~ 34266253 (-) |
| G1976901 | NA | non-coding | downstream | 207526 | 34240002 ~ 34246788 (-) |
| G1977046 | NA | non-coding | upstream | 22324 | 34477620 ~ 34478809 (-) |
| G1977048 | NA | non-coding | upstream | 23412 | 34479213 ~ 34479649 (-) |
| G1977049 | NA | non-coding | upstream | 24238 | 34480039 ~ 34480322 (-) |
| G1977050 | LOC100194703 | non-coding | upstream | 24850 | 34480651 ~ 34481106 (-) |
| G1977090 | NA | non-coding | upstream | 98772 | 34554573 ~ 34563512 (-) |
| G1975763 | NA | other | downstream | 897503 | 33556430 ~ 33556811 (-) |
| G1975453 | NA | other | downstream | 1129989 | 33319729 ~ 33324325 (-) |
| G1974000 | NA | other | downstream | 2467430 | 31986443 ~ 31986884 (-) |
| G1973835 | LOC106611243 | other | downstream | 2835815 | 31614421 ~ 31618499 (-) |
| G1973793 | NA | other | downstream | 2869268 | 31584540 ~ 31585046 (-) |
| G1977226 | NA | other | upstream | 419584 | 34875385 ~ 34876181 (-) |
| LOC110505829 | LOC106611279 | other | upstream | 514351 | 34970065 ~ 35000444 (-) |
| G1977346 | NA | other | upstream | 571299 | 35027100 ~ 35100978 (-) |
| G1977392 | NA | other | upstream | 597249 | 35053050 ~ 35056926 (-) |
