Gene
RNA
| Item | Value |
|---|---|
| gene id | G1976887 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 34566914 ~ 34670890 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2259868 | True | 617 | lncRNA | 0.41 | 3 | 34566914 | 34670890 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504230 | LOC106611223 | coding | downstream | 124571 | 34292468 ~ 34442343 (-) |
| gphna | LOC106611263 | coding | downstream | 331369 | 34118176 ~ 34235545 (-) |
| LOC118944181 | NA | coding | downstream | 398656 | 34167460 ~ 34168258 (-) |
| mpp5a | LOC106611266 | coding | downstream | 449067 | 34073214 ~ 34117847 (-) |
| eif2s1a | if2a | coding | downstream | 494305 | 34069156 ~ 34072609 (-) |
| pth2 | NA | coding | upstream | 28279 | 34699169 ~ 34700207 (-) |
| rin3 | LOC106611275 | coding | upstream | 44838 | 34715728 ~ 34739802 (-) |
| LOC110505825 | LOC106611276 | coding | upstream | 103994 | 34774884 ~ 34893972 (-) |
| LOC110504231 | LOC106611278 | coding | upstream | 226686 | 34897576 ~ 34912793 (-) |
| LOC118944354 | LOC106611278 | coding | upstream | 242020 | 34912910 ~ 34950168 (-) |
| G1977090 | NA | non-coding | downstream | 3402 | 34554573 ~ 34563512 (-) |
| G1977050 | LOC100194703 | non-coding | downstream | 85808 | 34480651 ~ 34481106 (-) |
| G1977049 | NA | non-coding | downstream | 86592 | 34480039 ~ 34480322 (-) |
| G1977048 | NA | non-coding | downstream | 87265 | 34479213 ~ 34479649 (-) |
| G1977046 | NA | non-coding | downstream | 88105 | 34477620 ~ 34478809 (-) |
| G1977175 | NA | non-coding | upstream | 71418 | 34742308 ~ 34742527 (-) |
| G1977166 | NA | non-coding | upstream | 79639 | 34750529 ~ 34752123 (-) |
| G1977163 | NA | non-coding | upstream | 84598 | 34755488 ~ 34756430 (-) |
| G1977161 | NA | non-coding | upstream | 85418 | 34756308 ~ 34772312 (-) |
| G1975763 | NA | other | downstream | 1010103 | 33556430 ~ 33556811 (-) |
| G1975453 | NA | other | downstream | 1242589 | 33319729 ~ 33324325 (-) |
| G1974000 | NA | other | downstream | 2580030 | 31986443 ~ 31986884 (-) |
| G1973835 | LOC106611243 | other | downstream | 2948415 | 31614421 ~ 31618499 (-) |
| G1977226 | NA | other | upstream | 204495 | 34875385 ~ 34876181 (-) |
| LOC110505829 | LOC106611279 | other | upstream | 299262 | 34970065 ~ 35000444 (-) |
| G1977346 | NA | other | upstream | 356210 | 35027100 ~ 35100978 (-) |
| G1977392 | NA | other | upstream | 382160 | 35053050 ~ 35056926 (-) |
| G1979142 | NA | other | upstream | 1541056 | 36211946 ~ 36216230 (-) |
