G1976775


Basic Information

Item Value
gene id G1976775
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 34875242 ~ 34876230 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2259744
gatttcttatcgtccgggctctaagaacaccaagcctgatgctttgtctcgtctcttcagttcttcagtagcctccactgaccccgaggggattctccctgaggggcgtgttgtcgggttgactgtctggggaattgagaggcaggtaaaacaagcgctcactcacactccgtcgccgcgcgcttgtcctaggaaccttcttttcgttcccgttcctactcgtctggccgttcttcagtgggctcactctgccaagttggtcgcatcttacgcagtctttcttttcgtaaccctgcgtcttggtcagaacagctcccctgggcagaatatgcccacaactcgcttccttcgtctgcgaccgggctatctccttttcagagtagcctcgggtaccagcctccgctgttctcatctcagttcgccgagtccagcgtcccctccgctcaggcttttgtccaacgttgcaagcgcacctggaagaggg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2259744 True 484 lncRNA 0.56 2 34875242 34876230

Neighbor

gene id symbol gene type direction distance location
LOC110505824 snap23 coding upstream 104222 34750884 ~ 34771020 (+)
tmem121aa LOC106602575 coding upstream 189503 34681732 ~ 34685739 (+)
tedc1 LOC106611146 coding upstream 398095 34457515 ~ 34477147 (+)
dnal1 dnal1 coding upstream 422655 34446701 ~ 34452841 (+)
LOC110504337 NA coding upstream 1586634 33282986 ~ 33288608 (+)
LOC110505830 LOC106611281 coding downstream 136465 35012695 ~ 35056944 (+)
LOC100305155 LOC106611282 coding downstream 212464 35088694 ~ 35100987 (+)
LOC110505832 mta1 coding downstream 290918 35167148 ~ 35240181 (+)
LOC110505833 LOC106611286 coding downstream 373089 35249319 ~ 35289164 (+)
LOC110504234 LOC106602716 coding downstream 663567 35539797 ~ 35611701 (+)
G1976755 NA non-coding upstream 42705 34825324 ~ 34832537 (+)
G1976753 NA non-coding upstream 50020 34824529 ~ 34825222 (+)
G1976694 NA non-coding upstream 102885 34756309 ~ 34772357 (+)
G1976688 NA non-coding upstream 135555 34739289 ~ 34739687 (+)
G1976687 NA non-coding upstream 148595 34726305 ~ 34726647 (+)
G1976777 NA non-coding downstream 19830 34896060 ~ 34897451 (+)
G1976778 NA non-coding downstream 22101 34898331 ~ 34898709 (+)
G1976793 NA non-coding downstream 23658 34899888 ~ 34900092 (+)
G1976794 NA non-coding downstream 25568 34901798 ~ 34965265 (+)
G1976808 NA non-coding downstream 61593 34937823 ~ 34938280 (+)
G1976689 NA other upstream 143931 34730027 ~ 34731311 (+)
G1976680 NA other upstream 171348 34701980 ~ 34703894 (+)
G1976575 NA other upstream 393321 34481519 ~ 34481921 (+)
G1976574 LOC100194703 other upstream 393963 34480904 ~ 34481279 (+)
G1976573 LOC100194703 other upstream 394345 34480030 ~ 34480897 (+)
G1978080 NA other downstream 1150303 36026533 ~ 36027737 (+)
LOC110505847 LOC106611313 other downstream 1513041 36376220 ~ 36824709 (+)
LOC110504241 dnah14 other downstream 2342031 37161387 ~ 37222396 (+)
hivep2b LOC106611354 other downstream 2388550 37264780 ~ 37311200 (+)
G1980026 NA other downstream 2844904 37721134 ~ 37729904 (+)

Expression


Co-expression Network