G1978815



Basic Information


Item Value
gene id G1978815
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 35583274 ~ 35583659 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2262108
agataaagcatagcagtgtgaactgacaacacagagttacacatggagtgaacaattaacaagtcaataacacagtagaaaaaaaaagagagtctatatacattgtgtgcaaaaggcatgaggaggtaggcgaataattacaatttagcagattaacactggagtgataaatgatcagatggtcatgtacaggtagatatactggtgtgcaaaagagcagaaaagtaaataaatataaacagtatggggatgaggtaggtaaattgggtgggctatttacctatagactatgtacagctgcagcgatcggttagctgctcagatagcagatgtttgaagttggtgagggagataaaagtctccaacttcagcgatttttgcaattc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2262108 True 386 lncRNA 0.38 1 35583274 35583659

Neighbor


gene id symbol gene type direction distance location
LOC118944372 NA coding downstream 79465 35501929 ~ 35503809 (-)
LOC110505834 LOC106611287 coding downstream 180853 35399388 ~ 35402421 (-)
LOC110505831 LOC106611283 coding downstream 441569 35116484 ~ 35141705 (-)
LOC110505829 LOC106611279 coding downstream 582830 34970065 ~ 35000444 (-)
LOC118944135 NA coding downstream 621991 34959801 ~ 34961283 (-)
LOC118944362 NA coding upstream 41007 35624666 ~ 35691185 (-)
LOC110505835 LOC106611306 coding upstream 250644 35834303 ~ 35848927 (-)
LOC118944267 NA coding upstream 446485 36030144 ~ 36031263 (-)
LOC110504236 LOC106611337 coding upstream 448098 36031757 ~ 36093649 (-)
LOC110504237 LOC106611328 coding upstream 741772 36325431 ~ 36370245 (-)
G1977818 NA non-coding downstream 68540 35514510 ~ 35514734 (-)
G1977817 NA non-coding downstream 74843 35508046 ~ 35508431 (-)
G1977803 NA non-coding downstream 99796 35482788 ~ 35483478 (-)
G1977799 NA non-coding downstream 103791 35476345 ~ 35479483 (-)
G1977651 NA non-coding downstream 241494 35341021 ~ 35341780 (-)
G1978817 NA non-coding upstream 1114 35584773 ~ 35584994 (-)
G1978818 NA non-coding upstream 4856 35588515 ~ 35589777 (-)
G1978819 NA non-coding upstream 7789 35591448 ~ 35592755 (-)
G1978820 NA non-coding upstream 10751 35594410 ~ 35595073 (-)
G1978821 NA non-coding upstream 11466 35595125 ~ 35598255 (-)
G1977346 NA other downstream 482296 35027100 ~ 35100978 (-)
G1977392 NA other downstream 526348 35053050 ~ 35056926 (-)
G1977226 NA other downstream 707093 34875385 ~ 34876181 (-)
G1977046 NA other downstream 1104716 34477620 ~ 34478809 (-)
G1979142 NA other upstream 628287 36211946 ~ 36216230 (-)
G1979607 NA other upstream 1381515 36965174 ~ 36965719 (-)
G1979813 NA other upstream 1754087 37337746 ~ 37338882 (-)
G1980619 LOC106611366 other upstream 2619782 38203441 ~ 38204163 (-)

Expression



Co-expression Network