G1978820


Basic Information

Item Value
gene id G1978820
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 35594410 ~ 35595073 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2262114
cacacctccatccctagtgcctggtcacaccctcatccctagtgcctggtcataCCTCCATCcttagtgcctggtcacacctccatccttagtgcctggtcacacctccatccttagtgcctggtcacacctccatccctagtgactggtcacacctccatctctagtgcctggtcacacctccatccctagtgcctggtcacacctccatccctagtgcctggtcacacctccatccctagtgcctggtcaaaCCTCCAtctctagtgcctggtcacacctccatccctagtgcttggtcacacctccatccccagtgcctggtcacacctccatccctagtgcctggccacacctccatccctagtgagacctccatccctagtgcctggtcacacctccatccctagtgcctggtcacacctccatccctagtgcctggtcacacctccatccctagtgcctggccacacctccatccctagtgcctggtctggtcacacctccatccctagtgcctggtcagacctccatccctagtgcctggtcacacccccatccctagtcagacctccatccctagtgcctggtcacacctccatccctagtgcctggtcacacctccatccctagtgcctggtcacacctccatccccagtgcctg

Function

NR:

description
PREDICTED: extensin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2262114 True 664 lncRNA 0.59 1 35594410 35595073

Neighbor

gene id symbol gene type direction distance location
LOC118944372 NA coding downstream 90601 35501929 ~ 35503809 (-)
LOC110505834 LOC106611287 coding downstream 191989 35399388 ~ 35402421 (-)
LOC110505831 LOC106611283 coding downstream 452705 35116484 ~ 35141705 (-)
LOC110505829 LOC106611279 coding downstream 593966 34970065 ~ 35000444 (-)
LOC118944135 NA coding downstream 633127 34959801 ~ 34961283 (-)
LOC118944362 NA coding upstream 29593 35624666 ~ 35691185 (-)
LOC110505835 LOC106611306 coding upstream 239230 35834303 ~ 35848927 (-)
LOC118944267 NA coding upstream 435071 36030144 ~ 36031263 (-)
LOC110504236 LOC106611337 coding upstream 436684 36031757 ~ 36093649 (-)
LOC110504237 LOC106611328 coding upstream 730358 36325431 ~ 36370245 (-)
G1978819 NA non-coding downstream 1655 35591448 ~ 35592755 (-)
G1978818 NA non-coding downstream 4633 35588515 ~ 35589777 (-)
G1978817 NA non-coding downstream 9416 35584773 ~ 35584994 (-)
G1978815 NA non-coding downstream 10751 35583274 ~ 35583659 (-)
G1977818 NA non-coding downstream 79676 35514510 ~ 35514734 (-)
G1978821 NA non-coding upstream 52 35595125 ~ 35598255 (-)
G1978823 NA non-coding upstream 10010 35605083 ~ 35605447 (-)
G1978827 NA non-coding upstream 16426 35611499 ~ 35611718 (-)
G1978877 NA non-coding upstream 83894 35678967 ~ 35679211 (-)
G1978882 NA non-coding upstream 92918 35687991 ~ 35688209 (-)
G1977346 NA other downstream 493432 35027100 ~ 35100978 (-)
G1977392 NA other downstream 537484 35053050 ~ 35056926 (-)
G1977226 NA other downstream 718229 34875385 ~ 34876181 (-)
G1977046 NA other downstream 1115852 34477620 ~ 34478809 (-)
G1979142 NA other upstream 616873 36211946 ~ 36216230 (-)
G1979607 NA other upstream 1370101 36965174 ~ 36965719 (-)
G1979813 NA other upstream 1742673 37337746 ~ 37338882 (-)
G1980619 LOC106611366 other upstream 2608368 38203441 ~ 38204163 (-)

Expression


Co-expression Network