G1977925


Basic Information

Item Value
gene id G1977925
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 35694924 ~ 35695232 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2261034
gaaagaactgggacattttcagattccAGGGATTTTGTGCACATCCTTACAACATGgggtcgtgcattatcatgctgaaacatgaggtgatggctgcagatgaatggcacgacaatgggcctcaggatctcgtcacagtatctctgcattcaaattgccatcgataaaatgcagttgtattcattgtccgtagtttatgcctgtccataccgtaaccccaccgccaccatgggacactgttcacaacgttgacatcagcaaaccactcatccacacaatgccatatacagtgtctaccatctgcccggt

Function

NR:

description
hypothetical protein EH28_04398

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2261034 True 309 lncRNA 0.47 1 35694924 35695232

Neighbor

gene id symbol gene type direction distance location
LOC110504234 LOC106602716 coding upstream 83223 35539797 ~ 35611701 (+)
LOC110505833 LOC106611286 coding upstream 405760 35249319 ~ 35289164 (+)
LOC110505832 mta1 coding upstream 454743 35167148 ~ 35240181 (+)
LOC100305155 LOC106611282 coding upstream 593937 35088694 ~ 35100987 (+)
LOC110505830 LOC106611281 coding upstream 637980 35012695 ~ 35056944 (+)
LOC110504235 LOC106611305 coding downstream 169338 35864570 ~ 35866787 (+)
LOC110505837 LOC106611304 coding downstream 181211 35876443 ~ 35880427 (+)
LOC118944336 NA coding downstream 225643 35920875 ~ 35923934 (+)
LOC110504338 LOC106611336 coding downstream 399237 36094469 ~ 36097074 (+)
LOC110505842 LOC106611334 coding downstream 406052 36101284 ~ 36112211 (+)
G1977924 NA non-coding upstream 1276 35693416 ~ 35693648 (+)
G1977919 NA non-coding upstream 9136 35685557 ~ 35685788 (+)
G1977916 NA non-coding upstream 13145 35681276 ~ 35681779 (+)
G1977911 NA non-coding upstream 25625 35669011 ~ 35669299 (+)
G1977934 NA non-coding downstream 15652 35710884 ~ 35711187 (+)
G1977941 NA non-coding downstream 26803 35722035 ~ 35722272 (+)
G1977947 NA non-coding downstream 34750 35729982 ~ 35730540 (+)
G1977948 NA non-coding downstream 40362 35735594 ~ 35735919 (+)
G1977949 NA non-coding downstream 41745 35736977 ~ 35737373 (+)
G1976689 NA other upstream 963613 34730027 ~ 34731311 (+)
G1976680 NA other upstream 991030 34701980 ~ 34703894 (+)
G1976575 NA other upstream 1213003 34481519 ~ 34481921 (+)
G1976574 LOC100194703 other upstream 1213645 34480904 ~ 34481279 (+)
G1976573 LOC100194703 other upstream 1214027 34480030 ~ 34480897 (+)
G1978080 NA other downstream 331301 36026533 ~ 36027737 (+)
LOC110505847 LOC106611313 other downstream 694039 36376220 ~ 36824709 (+)
LOC110504241 dnah14 other downstream 1523029 37161387 ~ 37222396 (+)
hivep2b LOC106611354 other downstream 1569548 37264780 ~ 37311200 (+)
G1980026 NA other downstream 2025902 37721134 ~ 37729904 (+)

Expression


Co-expression Network