G1977983


Basic Information

Item Value
gene id G1977983
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 35809418 ~ 35809646 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2261097
CCCATTAACACTGTCATTTACCTTGACAATAACCATTGACATCAATGCGTGATTTATGGGATCAgagttacagatgtaggatcttaatttgagccagtctcctacagcaggaaaataatcctgcagcaacaggaaatgtgaattattatgtggattataattgatGGATTTTTGTTTGTACGGGTTGATAAATTTATCGTTAGGGCAAATTAGGTCTGACATTTTAATG

Function

NR:

description
nucleotide-binding oligomerization domain-containing protein 2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2261097 True 229 lncRNA 0.35 1 35809418 35809646

Neighbor

gene id symbol gene type direction distance location
LOC110504234 LOC106602716 coding upstream 197717 35539797 ~ 35611701 (+)
LOC110505833 LOC106611286 coding upstream 520254 35249319 ~ 35289164 (+)
LOC110505832 mta1 coding upstream 569237 35167148 ~ 35240181 (+)
LOC100305155 LOC106611282 coding upstream 708431 35088694 ~ 35100987 (+)
LOC110505830 LOC106611281 coding upstream 752474 35012695 ~ 35056944 (+)
LOC110504235 LOC106611305 coding downstream 54924 35864570 ~ 35866787 (+)
LOC110505837 LOC106611304 coding downstream 66797 35876443 ~ 35880427 (+)
LOC118944336 NA coding downstream 111229 35920875 ~ 35923934 (+)
LOC110504338 LOC106611336 coding downstream 284823 36094469 ~ 36097074 (+)
LOC110505842 LOC106611334 coding downstream 291638 36101284 ~ 36112211 (+)
G1977980 NA non-coding upstream 2459 35806617 ~ 35806959 (+)
G1977953 NA non-coding upstream 62016 35746933 ~ 35747402 (+)
G1977952 NA non-coding upstream 63073 35746075 ~ 35746345 (+)
G1977949 NA non-coding upstream 72045 35736977 ~ 35737373 (+)
G1977948 NA non-coding upstream 73499 35735594 ~ 35735919 (+)
G1977986 NA non-coding downstream 6169 35815815 ~ 35816016 (+)
G1977988 NA non-coding downstream 9080 35818726 ~ 35818934 (+)
G1978063 NA non-coding downstream 132348 35941994 ~ 35944180 (+)
G1978073 NA non-coding downstream 145534 35955180 ~ 35955379 (+)
G1976689 NA other upstream 1078107 34730027 ~ 34731311 (+)
G1976680 NA other upstream 1105524 34701980 ~ 34703894 (+)
G1976575 NA other upstream 1327497 34481519 ~ 34481921 (+)
G1976574 LOC100194703 other upstream 1328139 34480904 ~ 34481279 (+)
G1976573 LOC100194703 other upstream 1328521 34480030 ~ 34480897 (+)
G1978080 NA other downstream 216887 36026533 ~ 36027737 (+)
LOC110505847 LOC106611313 other downstream 579625 36376220 ~ 36824709 (+)
LOC110504241 dnah14 other downstream 1408615 37161387 ~ 37222396 (+)
hivep2b LOC106611354 other downstream 1455134 37264780 ~ 37311200 (+)
G1980026 NA other downstream 1911488 37721134 ~ 37729904 (+)

Expression


Co-expression Network