G1979021


Basic Information

Item Value
gene id G1979021
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 35926954 ~ 35928186 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2262345
GACGGACACAAAATAACATGAATCAATGTCCAGGCACCACTCACAATAGAACGTCATAGAATGTTGACGATGTGCCATTTTACTCAAATCTATttttaattggtcacatacacatggttaccagatgttattggtcacatacacatgtttagcagaagttattggtcacatacacatggttagcagatgttattggtcacatacacatgtttagcagaagTTATtattcacatacacatgtttagcagaagttattggtcacatacacatggttaccagatgttattggtcacatacacatgtttagcagaagttattggtcacatacacatggttaccagatgttattggtcacatacacatgtttagcagaagttattggtcacatacacatgtttagcagaagttattggtcacatacacatggttagcagatgttattggtcacatacacatgtttagaagaagttattggtcacatacacatggttagcagatgttattggtcacatacacatggttagcagaagttattggtcacatacacatggttagcagatgttattggtcacatacacatggttagcagaagttattggtcacatggttagcagatgttattggtcacatacacatggttagcagatgttattggtcacatacacatggttaccagatgttattggtcacatacacatggttaccagatgttattggtcacatacacatgtttagcagaagTTATtattcacatacacatgtttaccagatgttattggtcacatacacatgtttagcagaagTTATtattcacatacacatgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2262345 True 824 lncRNA 0.36 2 35926954 35928186

Neighbor

gene id symbol gene type direction distance location
LOC110505835 LOC106611306 coding downstream 78027 35834303 ~ 35848927 (-)
LOC118944362 NA coding downstream 235769 35624666 ~ 35691185 (-)
LOC118944372 NA coding downstream 423145 35501929 ~ 35503809 (-)
LOC110505834 LOC106611287 coding downstream 524533 35399388 ~ 35402421 (-)
LOC110505831 LOC106611283 coding downstream 785249 35116484 ~ 35141705 (-)
LOC118944267 NA coding upstream 101958 36030144 ~ 36031263 (-)
LOC110504236 LOC106611337 coding upstream 103571 36031757 ~ 36093649 (-)
LOC110504237 LOC106611328 coding upstream 397245 36325431 ~ 36370245 (-)
LOC110505848 LOC106611327 coding upstream 468214 36396400 ~ 36405233 (-)
LOC110505851 LOC106611325 coding upstream 487262 36415448 ~ 36427489 (-)
G1978960 NA non-coding downstream 92913 35833731 ~ 35834041 (-)
G1978952 NA non-coding downstream 106369 35820300 ~ 35820585 (-)
G1978915 NA non-coding downstream 177177 35749524 ~ 35749777 (-)
G1978907 NA non-coding downstream 197269 35729481 ~ 35729685 (-)
G1978891 NA non-coding downstream 221919 35704800 ~ 35705035 (-)
G1979032 NA non-coding upstream 21837 35950023 ~ 35950228 (-)
G1979034 NA non-coding upstream 23882 35952068 ~ 35952429 (-)
G1979039 NA non-coding upstream 37097 35965283 ~ 35965518 (-)
G1979040 NA non-coding upstream 38181 35966367 ~ 35966677 (-)
G1979041 NA non-coding upstream 40491 35968677 ~ 35968914 (-)
G1977346 NA other downstream 825976 35027100 ~ 35100978 (-)
G1977392 NA other downstream 870028 35053050 ~ 35056926 (-)
LOC110505829 LOC106611279 other downstream 947447 34970065 ~ 35000444 (-)
G1977226 NA other downstream 1050773 34875385 ~ 34876181 (-)
G1977046 NA other downstream 1448396 34477620 ~ 34478809 (-)
G1979142 NA other upstream 283760 36211946 ~ 36216230 (-)
G1979607 NA other upstream 1036988 36965174 ~ 36965719 (-)
G1979813 NA other upstream 1409560 37337746 ~ 37338882 (-)
G1980619 LOC106611366 other upstream 2275255 38203441 ~ 38204163 (-)

Expression

G1979021 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 4.
End of interactive chart.

G1979021 Expression in each Bioproject

Bar chart with 18 bars.
G1979021 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
End of interactive chart.

Co-expression Network