G1978082


Basic Information

Item Value
gene id G1978082
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 35966406 ~ 35966722 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2261220
tgggaggggggctcagtaggccagtctgggtgagacggggtattagacaaggatgccctctatctgGGCAGCTGTACACACTAGCCATTGAGCCTTTTTTAGGACTGCTACGCAGGAGACTGCGGGGAGTGTGCTGGACAGGCATGGATGTGGTGACAGGAATAGCAGTCTCAGCATATGCAGATGAtgtttctgtgatggtcagggatgGGCAAGATATGCAGGAACTAGAGACCAGTCTGAAGGTGTACGAGGGAGCTTCATCAGCTAAGGTAAACTGGGGCAagagcaaagctctgttatgtggggcatggggg

Function

NR:

description
pol-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2261220 True 317 lncRNA 0.54 1 35966406 35966722

Neighbor

gene id symbol gene type direction distance location
LOC118944336 NA coding upstream 42472 35920875 ~ 35923934 (+)
LOC110505837 LOC106611304 coding upstream 85979 35876443 ~ 35880427 (+)
LOC110504235 LOC106611305 coding upstream 99619 35864570 ~ 35866787 (+)
LOC110504234 LOC106602716 coding upstream 354705 35539797 ~ 35611701 (+)
LOC110505833 LOC106611286 coding upstream 677242 35249319 ~ 35289164 (+)
LOC110504338 LOC106611336 coding downstream 127747 36094469 ~ 36097074 (+)
LOC110505842 LOC106611334 coding downstream 134562 36101284 ~ 36112211 (+)
LOC110505840 LOC106611332 coding downstream 145635 36112357 ~ 36120256 (+)
LOC110505839 LOC106611331 coding downstream 153668 36120390 ~ 36150603 (+)
LOC110505843 LOC106611333 coding downstream 184693 36151415 ~ 36212745 (+)
G1978074 NA non-coding upstream 10341 35955852 ~ 35956065 (+)
G1978073 NA non-coding upstream 11027 35955180 ~ 35955379 (+)
G1978063 NA non-coding upstream 22226 35941994 ~ 35944180 (+)
G1977988 NA non-coding upstream 147472 35818726 ~ 35818934 (+)
G1978085 NA non-coding downstream 13209 35979931 ~ 35980141 (+)
G1978094 NA non-coding downstream 27209 35993931 ~ 35995796 (+)
G1978096 NA non-coding downstream 32166 35998888 ~ 35999181 (+)
G1978097 NA non-coding downstream 34269 36000991 ~ 36001274 (+)
G1978098 NA non-coding downstream 36333 36003055 ~ 36003406 (+)
G1976689 NA other upstream 1235095 34730027 ~ 34731311 (+)
G1976680 NA other upstream 1262512 34701980 ~ 34703894 (+)
G1976575 NA other upstream 1484485 34481519 ~ 34481921 (+)
G1976574 LOC100194703 other upstream 1485127 34480904 ~ 34481279 (+)
G1976573 LOC100194703 other upstream 1485509 34480030 ~ 34480897 (+)
G1978080 NA other downstream 59811 36026533 ~ 36027737 (+)
LOC110505847 LOC106611313 other downstream 422549 36376220 ~ 36824709 (+)
LOC110504241 dnah14 other downstream 1251539 37161387 ~ 37222396 (+)
hivep2b LOC106611354 other downstream 1298058 37264780 ~ 37311200 (+)
G1980026 NA other downstream 1754412 37721134 ~ 37729904 (+)

Expression


Co-expression Network