G1979142


Basic Information

Item Value
gene id G1979142
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 36211946 ~ 36216230 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2262487
ATGTGACATAAAACCATGTTTTTAAAATTAACATGAGAAACAAATGAATACCAGAAGCATAGCAGTATATAACACATAGAAAGATAAATAACATTTCGGGAAGTTTATGGTTTGTCATTTTGCCATTTTTTGTCATTTTCTCTCTGCAAACAATAAAACAATCATAATGTGCAGTATGTACCTTTCTATTGCCTCTGTTGGCTAGAAGGAAATCATTCTAGAATGGTTGGTAGCTCTAGAATGGTTGGTAGCTCTAGAAAGGTTGGGAGTTCTTGAACGAGTGGTACTGTAGCTCTAGAACAGTTTGTAACTATAACTGTTTATGGCTCTAGAACTGTTGGTATCTCTAGAACAGTTTGTAGCTCTAGAACTGTTGGTAGCTCTAGAACAGTTTGTAGTTCTAGAACTGTTGGTAGCTCTAGAACAGTTTGTAGCTCTAGAACAGTTTGTAGCTCTAGAACTGTTGGTAGCTCTAGAACAGTTTGTAGCTCTAGAACAGTTTGTAGCTCAAGAACTGTTACTGGTTCTAGAACTGTTGGGGGTTCTACATTTTAAGGAAGACCAAGTAAATGTATGGCCGGGATTTTATCATGCAAAATATGGACATCAACAACAGCAACATATGGAATGTAGTTATATCTGTATATTGACACACAAAGTCTGCATTTTTGGCACAAATGTAAAGGCTGAACAAAAGTACTCTACTTTTCCTCCGGAACAACAATAAATAAATCCTATTTTTCCACAAGGTAACTGACTGAGACTAAAACTCCTACTTAAAAGGCTGATTGATATTCTTATATCTGCATGAATGGGTTTTTGACTTTATTCAGCACTTTATACAGAACATCTAGGCAGTAGGCACAAACTCAAATCATAATATTGCATTCCTATCTGTGAGCGGAGTGAAGAGGGAAAACAATATCTGACTTTTCAAAAGGTTTTATCTCAGCACTTTCCTTAGATcttgaatgtacagtaccagtcaaaggcttggacacacctactcattcaagggtttttcttcatttttattattttctacattgtagaataatagtgaagtcatcaaatctataaaataacacatatagaatcatgtagtaaataaaaaagtgttaaatgaaaatatatttgagattcttcaaagtagccaccttttttcttgatgacagctttgcacacacagGTGTTTGTGGATGctatgtcatctgatgcagcaccatcactctccttcttggtcgaatagcccttacacagcctggaggtgtgttgggtcattttcctgttgaaaaataaatgatagtcccactaagcgcaaaccagatgggatggcttatcactgcagaatgctgtggtagccatgctggttaagtatgcctttaattctaaataaatcactgacagtgtcaccagcaaagcacccccacacctcctccatgcttcatggtgggaaccacacatgcggagatcatctgttcacctactctgcgtctcacaaagtcacggcggttggaaccaaaaatttcaaatttggacttaccagaccagaggacacttTTCCACCagcctaatgtccattgctcatgtttcttgacccaagcaagtctcttcttattattattattattgctgtcctttagtagtggtttctttgttgCAGCAATGTGAACATGAAGGTCTgatacacagtctcctctgaacagttgatgttgagatgtgtctattgcTTGAAATCTTTGaaacatttattttggctgcaatctgaAGTGCAGTTAACTTTAAcaaacttattctctgcagcagcggtaactctgggtctttcctgtggcggttcacctgagagccagttccatcatagcgcttgatggtttttgcgactgcacttgaatgtAAACTTTCACATTTCTTGAAATGTTTcacattgactgacattcatgtcttaaagtaacgatgaactgtcatttctctttgcttatttaagctgtttttgccataatatggacttggtcttttaccaaatagggctatcttctgtataccacccctaccagtcacaacataactgattggttcaaacgcattaaggaaagaaattccaaaaatgatcttttaacaaggcacacctgttaattgacatgcattccaggtgactacgtcatgaagctggttgagagaatgccaagcgtgtgcaagctgtcatcaaggcaaggggtggctattttgaagaatctcaaatataaaatctattctgatttgtctaacacttttcatttcatagttttgatgtcttcaatattattctacttTATCAATGATTTAATTCCACTAGCAAACTAAAATAACACCCAGAATGATAAGATCACGTAAAATAAGTAACCAAATAAAAACATGACATTTAGAACAACGGATAGTTAGAATCCACTTCTTTGTTCTTCTATTCCTGGACACAGTGTAGTAGGTTGATAAGGCCTTGTACTTCGTTTAAAGGATAGCTGACTGTACTTTACACATTATCTCAATGCTAAATGTTCAAGTACAACTTCAGTACAGTTCATTGCTTAACCAGTGTTTCAATTTAGCGTAAACATGTTATTATTATGTAATAACATGACATGAACCAAACCCTACTCTTCTCCGTCTGGCCCTTTATCGTGTCACATTGCTAAACCTAACATTTATTATCTAGTTATTCATTTCAGAGATAAATGCAAACACTGAACAACAGAAATGTCCGTCGATCAGAAGAGTGTTTTATTGTATCTGATATCCTCCTGATTCAACAGAGGTAGTTTCCTGCTCTTGTCCACCCCACATCTGTTCTCTGCTCTAAATCATTTAATATTCTAAACCAAAACCAGACTTTGTCTGGTTAACCCCTCTTGCCCTGTCTCCTAATGATCTGTCCTTCTAGCTGTCTGGTAAACCCCTCTTGCCCTGTCTCCTAATGATCTGTCCTTCTAGCTGTCTGGTTAACCCCTCTTGCCTTGTCTCCTAATGATCTGTCCTTCTAGCTGTCTGGTTAACCCCTCTTGCCCTGTCTCCTAATGATCTGTCCTTCTAGCTGTCTGGTTAACCCCTCTTGCCTTGTCTCCTAATGATCTGTCCTTCTAGCTGTCTGGTTAACCCCTCTTGCCCTGTCTCCTAATGATCTGTCCTTCTAGCTGTCTGGTTAACCCCTCTTGCCTTGTCTCCTAATGATCTGTCCTTCTAGCGGTCTGGTTAACCCCTCTTGCCTTGTCTCCTAATGATCTGTCCTTCAGCTGTCTGGTTAACCCCTCTTGCCTTGTCTCCTAATGATCTGTCTATCTAGCTGTCTGGTTAACCCCTCTTGCCCTGTCACCTAATGATCTGTCCATTCAGCTGTCTGGTTAACCCCTCTTGCCCTGTCTCCCAATAATCTGTCATTTCTGCCATCTGGTTAACCCTTCTTGCTGTGTGTCCCAATAATATGTCAATTTTAAGAAATATAGCAGTCTAGCACATGCTCagaccaatccaatgcttttaactGCAGGAGAAAGGCCAGATTATTGAGACGCAGGGTTGCTGTCTGCTCCCTCCAGACTCTTTAATGATTACACAGCAACTGACCCCTAAACAAGCAGGTCTGGAGCCCATTAGGGCCTAGCCTACTGACTATTAGTTAACCACACATTTAGAATATGTGACCCAAATTGCGCCCCATTGGCTATAttgtgcactatttttgacccaTTGGGCtgatggctctggtcaaaagtagtgcactatgtcaggaatagagtgccatttgagagTCAGCACTGCATACAGTTCCCAAACTCCTATCTATCTATCAAGTCACATGAACATGTTCCAGTCCTGGTTTCTTTTAAGCCATCAAAGCTAGTCTCATCTGTCCACAACCTTTCTGTGTCGGCCTCCTGTCGTCACCTATGTACAGGTGTATAGGTGAATATGTTGTAACGAAAGATCACAATATAATATTCATTTCAAACTAATGTCCTgagttcctctccctctcttcgctTTATGTGGTCAATAAATACGGTCACTACTGAGTGACTAGTTTAGTGGATGAGGGACGAGACACCATTTAGTAGCTTCTCTCACTTTGTTTTGTTTCTATAAaatattaactatgagaagaatTCATCCGATTCTAACAACGGGACATTTCCCTGATTAAAATAAACAACAGCCCCCATAGGCTCCCTACGACCAAACAACC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2262487 True 4213 TUCP 0.40 2 36211946 36216230

Neighbor

gene id symbol gene type direction distance location
LOC110504236 LOC106611337 coding downstream 118297 36031757 ~ 36093649 (-)
LOC118944267 NA coding downstream 180683 36030144 ~ 36031263 (-)
LOC110505835 LOC106611306 coding downstream 363019 35834303 ~ 35848927 (-)
LOC118944362 NA coding downstream 520761 35624666 ~ 35691185 (-)
LOC118944372 NA coding downstream 708137 35501929 ~ 35503809 (-)
LOC110504237 LOC106611328 coding upstream 109201 36325431 ~ 36370245 (-)
LOC110505848 LOC106611327 coding upstream 180170 36396400 ~ 36405233 (-)
LOC110505851 LOC106611325 coding upstream 199218 36415448 ~ 36427489 (-)
tulp4b LOC106611324 coding upstream 211542 36427772 ~ 36439798 (-)
LOC110505855 LOC106611321 coding upstream 441411 36657641 ~ 36673264 (-)
G1979168 NA non-coding downstream 16106 36194148 ~ 36195840 (-)
G1979162 NA non-coding downstream 21412 36190109 ~ 36190534 (-)
G1979094 NA non-coding downstream 91698 36117255 ~ 36120248 (-)
G1979103 LOC106611334 non-coding downstream 101854 36106627 ~ 36110092 (-)
G1978798 NA non-coding downstream 182164 36029295 ~ 36029782 (-)
G1979187 NA non-coding upstream 65251 36281481 ~ 36289756 (-)
G1979186 NA non-coding upstream 104029 36320259 ~ 36379517 (-)
G1979258 NA non-coding upstream 120250 36336480 ~ 36396279 (-)
G1979285 LOC106611313 non-coding upstream 169862 36386092 ~ 36386627 (-)
G1977346 NA other downstream 1110968 35027100 ~ 35100978 (-)
G1977392 NA other downstream 1155020 35053050 ~ 35056926 (-)
LOC110505829 LOC106611279 other downstream 1232439 34970065 ~ 35000444 (-)
G1977226 NA other downstream 1335765 34875385 ~ 34876181 (-)
G1977046 NA other downstream 1733388 34477620 ~ 34478809 (-)
G1979607 NA other upstream 748944 36965174 ~ 36965719 (-)
G1979813 NA other upstream 1121516 37337746 ~ 37338882 (-)
G1980619 LOC106611366 other upstream 1987211 38203441 ~ 38204163 (-)
G1981678 NA other upstream 2820057 39036287 ~ 39038944 (-)

Expression


Co-expression Network