G1979385


Basic Information

Item Value
gene id G1979385
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 36542158 ~ 36544636 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2262790
aacagggtatggtagtaggtgtctttgaacggggtatggtagtaggtgcctttgaacagggtatggtagtaggtgcctttgaacagggtatggtagtaggtgtctttgaacggggtatggtagtaggtgcctttgaacagggtatggtagtaggtgtctttgaacgggggtatggtagtaggtgcctttgaacaggggtatggtagtaggtgtctttgaacagggtatggtagtaggtgtctttgaacggggtatggtagtaggtgcctttgaacagggtatggtagtaggtgtctttgaacaggggtatggtagtaggtgtctttgaacagggtatggtagtaggtgtctttgaacagggtatggtagtaggtgtctttgaacagggtatggtagtaggtgtctttgaacagggtatggtagtaggtgcctttgaacgggggtatggtagtaggtgtctttgaacagggg

Function

NR:

description
Zgc:158327 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2262790 True 471 lncRNA 0.48 3 36542158 36544636

Neighbor

gene id symbol gene type direction distance location
tulp4b LOC106611324 coding downstream 102360 36427772 ~ 36439798 (-)
LOC110505851 LOC106611325 coding downstream 114669 36415448 ~ 36427489 (-)
LOC110505848 LOC106611327 coding downstream 136925 36396400 ~ 36405233 (-)
LOC110504237 LOC106611328 coding downstream 171913 36325431 ~ 36370245 (-)
LOC110504236 LOC106611337 coding downstream 448509 36031757 ~ 36093649 (-)
LOC110505855 LOC106611321 coding upstream 113005 36657641 ~ 36673264 (-)
LOC118944239 NA coding upstream 160864 36705500 ~ 36712775 (-)
sash1b LOC106611319 coding upstream 175303 36719939 ~ 36821246 (-)
stxbp5b LOC106611318 coding upstream 294772 36839408 ~ 36891866 (-)
LOC110504239 NA coding upstream 360437 36905073 ~ 36906800 (-)
G1979345 NA non-coding downstream 42997 36498883 ~ 36499161 (-)
G1979258 NA non-coding downstream 145879 36336480 ~ 36396279 (-)
G1979285 LOC106611313 non-coding downstream 155531 36386092 ~ 36386627 (-)
G1979186 NA non-coding downstream 162641 36320259 ~ 36379517 (-)
G1979420 LOC106611323 non-coding upstream 40609 36585245 ~ 36591872 (-)
G1979428 LOC106603506 non-coding upstream 79263 36623899 ~ 36627233 (-)
G1979473 NA non-coding upstream 154222 36698858 ~ 36699135 (-)
G1979465 NA non-coding upstream 167855 36712491 ~ 36715698 (-)
G1979142 NA other downstream 325928 36211946 ~ 36216230 (-)
G1977346 NA other downstream 1441180 35027100 ~ 35100978 (-)
G1977392 NA other downstream 1485232 35053050 ~ 35056926 (-)
LOC110505829 LOC106611279 other downstream 1562651 34970065 ~ 35000444 (-)
G1979607 NA other upstream 420538 36965174 ~ 36965719 (-)
G1979813 NA other upstream 793110 37337746 ~ 37338882 (-)
G1980619 LOC106611366 other upstream 1658805 38203441 ~ 38204163 (-)
G1981678 NA other upstream 2491651 39036287 ~ 39038944 (-)
G1981964 NA other upstream 3011984 39556620 ~ 39569809 (-)

Expression


Co-expression Network