Gene
RNA
| Item | Value |
|---|---|
| gene id | G1978440 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 36795654 ~ 36799376 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2261643 | False | 339 | lncRNA | 0.35 | 2 | 36795654 | 36796548 |
| TU2261644 | True | 328 | lncRNA | 0.36 | 3 | 36795654 | 36799376 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ddo | ddo | coding | upstream | 75999 | 36712283 ~ 36719655 (+) |
| trnal-uaa-61 | NA | coding | upstream | 95963 | 36699609 ~ 36699691 (+) |
| LOC110505858 | LOC106611340 | coding | upstream | 98463 | 36693964 ~ 36697191 (+) |
| rmnd1 | LOC106611322 | coding | upstream | 139776 | 36645560 ~ 36655878 (+) |
| LOC110504238 | LOC106611323 | coding | upstream | 164602 | 36449259 ~ 36631052 (+) |
| LOC118944353 | NA | coding | downstream | 51497 | 36850873 ~ 36852603 (+) |
| LOC110505865 | LOC106611339 | coding | downstream | 169125 | 36968501 ~ 36988155 (+) |
| LOC110505864 | LOC106611316 | coding | downstream | 188588 | 36987964 ~ 36993882 (+) |
| LOC110505867 | LOC106611342 | coding | downstream | 236877 | 37036253 ~ 37055807 (+) |
| vsnl1b | visl1 | coding | downstream | 257108 | 37056484 ~ 37065888 (+) |
| G1978428 | NA | non-coding | upstream | 17249 | 36778179 ~ 36778405 (+) |
| G1978398 | NA | non-coding | upstream | 53670 | 36739817 ~ 36741984 (+) |
| G1978368 | NA | non-coding | upstream | 86827 | 36707499 ~ 36708827 (+) |
| G1978312 | NA | non-coding | upstream | 302696 | 36492051 ~ 36492958 (+) |
| G1978280 | LOC106611324 | non-coding | upstream | 360982 | 36434137 ~ 36434672 (+) |
| G1978458 | NA | non-coding | downstream | 38395 | 36837771 ~ 36869823 (+) |
| G1978477 | NA | non-coding | downstream | 67263 | 36866639 ~ 36867130 (+) |
| G1978463 | NA | non-coding | downstream | 70562 | 36869938 ~ 36874367 (+) |
| G1978506 | NA | non-coding | downstream | 140139 | 36939515 ~ 36940256 (+) |
| G1978507 | NA | non-coding | downstream | 142880 | 36942256 ~ 36942585 (+) |
| LOC110505847 | LOC106611313 | other | upstream | 400438 | 36376220 ~ 36824709 (+) |
| G1978080 | NA | other | upstream | 767917 | 36026533 ~ 36027737 (+) |
| G1976689 | NA | other | upstream | 2064343 | 34730027 ~ 34731311 (+) |
| G1976680 | NA | other | upstream | 2091760 | 34701980 ~ 34703894 (+) |
| G1976575 | NA | other | upstream | 2313733 | 34481519 ~ 34481921 (+) |
| LOC110504241 | dnah14 | other | downstream | 418885 | 37161387 ~ 37222396 (+) |
| hivep2b | LOC106611354 | other | downstream | 465404 | 37264780 ~ 37311200 (+) |
| G1980026 | NA | other | downstream | 921758 | 37721134 ~ 37729904 (+) |
| G1980792 | NA | other | downstream | 1729231 | 38528607 ~ 38529105 (+) |
| LOC110505893 | dio2 | other | downstream | 1766502 | 38565810 ~ 38575881 (+) |
