XLOC_000387 (nlgn4xa)


Basic Information

Item Value
gene id XLOC_000387
gene name nlgn4xa
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007112.7
NCBI id CM002885.2
chromosome length 59578282
location 32521469 ~ 32693950 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00000658
tagtgagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagaggcgccTGGTCTCTCTccctttaatcttttttttcctccTAGTCAGTGCTGCCTCTTTCTATGGAGACAATCAGATTCTCTACAATTTACTGTTCCTCCGCAGTGATTTCAATGAATTACCTTAATCTATGTGGGTCATTTACATCAGATATGTTGCCGCGTCTCAGCTGAACAGTCCTCGGTGTGCAAGCTTTCCCTCGGACGGCAGCATCACGTTGGATTTTAACAGGGGCAGAACGGAGTTTGATTTTTCCCTTGTGTGGCACATACATTTTGACCGTACCTCTGGAAGTCGTGCGTCAGGATAGAAGCCGTACAATGCAGATACCGCAAAGGGAAACTACAAAAGGAGGAATTGAAAGGAGGGAGTAGTTGCACCAGAGCACAGCTCAGGGGGGAAAGAGCTGCATTTTGTTTTCTCGTCTAAAGCATAGAAGTCCAGAACAACAAGAATATAAGAGATACAGAATCGCCCTCATGGCATGGGGGAATGCCATGATCGTTGATCAGATTGGAGGGTGTGCTGTCAATCATCTGTCCATTGCAGCCTGAAGTCTGGGTTGTACCTTGGCTTTGGAGGAGTGGAGGACTTTGAATTCAAGCAACTCTGCCAACCGCAGCTGGACCATGTCACGGCTCAGAGGAACCCCATGGATACCACTTACCATGGTTCATCCGCTGGCTACTCTACGCCTTTTTACCTGGATTGTGCTTGCGGCTGCGTGGCTGGCCATTACATGGGCTCAGCAGCACCCTATTGTTACGACAAACTATGGCAAGCTAAGAGGCTTGAAAACACCTCTGCCCAATGAGATTCTAGGGCCCGTGGAACAGTATTTGGGGATCCCCTATGCCCTGCCGCCCACAGGAGAAAGAAGGTTTCAGCCCCCAGAGCCTCCAATGTCCTGGCCAGGGATTCGAAATGCTACACAGTTTGCTCCTGTTTGTCCTCAGTTTCTGGAAGATCGTTTTTTACTCAATGATATGTTACCCGTGTGGTTCACCGCCAACTTGGATACTGTTGTAACCTACGTACAAGATCAAAGTGAAGACTGCctgtacttaaacatttatgTTCCTACAGAAGACGTAGGAGCCAACAAAGGCGATGATTTCACCAATAATGAGGGTGGCGAAAATAAAGACATCCATGATGAGAATGGACTGAGACCTGTTATGGTGTACATCCATGGTGGATCCTACATGGAAGGAACAGGGAATATGATTGACGGCAGTATTCTAGCCAGCTATGGAAACGTCATTGTAGTGACCCTGAACTATAGGCTGGGAGTGCTGGGGTTCCTGAGTACAGGTGACCAGGCAGCCAAAGGGAATTATGGGCTGTTGGACCAGATCCAAGCACTGCGGTGGATCAAAGAGAATATCCAGGCTTTCAAAGGCGACCCGAAAAGGGTGACTATATTTGGATCAGGAGCTGGGGCGTCCTGTGTTAGCTTGCTGACCCTATCACACTATTCAGAAGATTTGTTTCAGAAAGCCATCATCCAGAGTGGGACTGCTCTGTCTAGCTGGGCCGTCAACTACCAGCCTGCCAAATACACCCGGATACTAGCTGAGAAAGTGGGCTGTAATATGCTAGATAGCATAGACCTGGTggaatgtctacagaacaagaaCTACAAGGAGCTGATTGAACAGTACATAACACAAGCCAAGTACCACATTGCGTTTGGTCCAGTAATTGACGGTGACGTCATCCCAGATGACCCCCAAATTCTGATGGAGCAAGGGGAGTTCCTCAACTATGACATCATGCTGGGTGTTAACCAGGGTGAGGGTTTTAAGTTTGTGGATGGCATCGTGGACAGTGAGGATGGTGTGTCTGCAAATGACTTTGACTTCGCCGTGTCTGATTTTGTGGACCATCTTTATGGTTATCCAGAGGGCAAGGACACGCTTCGAGAAACCATCAAGTTCATGTATACTGACTGGGCTGACAAGGAGAACCCGGAGACCAGGCGAAAGACTCTAGTTGCACTTTTCACTGATCACCAATGGGTGGCGCCAGCAGTAGCTACAGCAGACCTTCATGCTCAATATGGATCTCCaacatatttttatgctttttaccATCATTGTCAGAGTGAAATGAAACCTAGCTGGTCGGATTCAGCACACGGAGACGAGGTGCCTTATGTGTTTGGAATTCCCATGCTTGGCCCCACTGATCTCTTTAATTGTAATTTCTCCAAGAATGATGTCATGCTTTCGGCGGTGGTGATGACGTACTGGACAAATTTCGCTAAAACTGGGGATCCGAACCAGCCAGTTCCACAGGACACCAAATTCATACACACAAAGCCCAACCGCTTTGAGGAAGTAGCCTGGTCGAAATACAACCCCAAAGACCAGCTTTACTTACACATCGGACTGAAGCCAAGGGTGAGAGATCACTATCGCGCCACCAAGGTTGCTTTCTGGTTAGAACTGGTACCTCATCTCCATAACATCAACGAACTCTTTCAGTATGTCTCGACCACTACAAAGATACCTCCTCAGGATACTACACCTTTCCCATACACTAAACGACTAGGTAAAACATGGCCATCCACCACACGACACCCTGGTGTTCCTCCTGCCAACACCAAACAAACCACAGACCAGCGTAAAGGCAATGATTTGAGTGATGACTCAGCAGTGGTTATCGAGACAAAGCGCGATTACTCGACCGAACTCAGTGTGACCATAGCAGTAGGTGCTTCTCTCCTTTTCCTCAACATTCTGGCATTCGCAGCGCTCTACTACAAGAAGGATAAACGTCGACATGAATCCAACCGACGAGGACCAAGCCCGCAGCGGAACTCTGCGCCAGCTAATGTGGTGGCTAACGCTAATGACATAGCACATTTGCAGAGTGATGAGCTGATGTCACTTCAGATGAAACAGCAGCAGATGGAACACGAGCACCATCATGAGTGCGATTCTTTACAAGCTCACGATACGCTTCGTCTTACCTGCCCGGCTGATTATACGCTTACCCTGCGACGTTCACCTGATGACATCCCACTCATGACGCCAAGTACCATAACAATGATTCCTAACACTCTGGCCGGAATGCAGACCCTGCACAATTTCAACACATTCGGAGGCAGTCAGAACAGTACCAACTTGCCCCATGGGCATTCCACCACCAGGGtatagcttctttttttttttagaactacaGAACATGGTCTGCTAAGGCAGTGGGGGATAAAGGACCTTTGTTTGTTATGGCAAACTGTGCTGACTTTGTTCCACTCTGAGACTTATCATGGTGGATGAGATGTTATTTTCCTATGAAGCCTTCTTGCAGAATATATCAAAGTCAAATATGACCTacttgcgaaaaaaaaaaaaaaatgaatgttacTAGAGTAATACTTTATTTGGAGCCAAGCTTGTTAAGGGCAGGGGACTTTACACCAAAAGATAAGAAGAACTCTTTCTGAAAGACTATTTTGCTTGCGTAGAAAACATATACACCAACAACAGAGAGGATCTGATGATGCTTTGTATGTGCCATAACTTGTCATATACCATGAGCAACAATGAGAGCAATGTTATTATGTGAGAGCTATATTTCCgatacacacattattattattttctgagaGCTTTGTCACATAATGAACATGTGGACTGAACTTAAAAATCCCAGCCTGAAATGTAATTATGACAAAATTTGTAAAGGTGACATAATGTACATACTTGTGAGtcaaatagaaatattaaaagaATTACAAAAGCTTTTATTGTTGTTTAGTTCAAAATATGACTATTAATGAGCTTACGCTTCTGTTAAGGtgtatgtaaataaatcaatcattatcttttgttttgttttgcttttttttggaaTCATGTCTGTGCTTAACAGCTTTTAAAATCAAGAAAAGAAATAAAGGAGAAGACAGTATTATTATTCCAAAGCCTCTAAGTATCCATTTCAGTCATTTAAGTGTTCCTTTGTCCCaatgtttgacaaatattgcatgTTTGATTGCTGCTTTACATTTGATAACCTCATACCGTGACCCCATGCGGATGTTAAAAATGAAAGATTGCTTCTAATTACATTACAGTGCTGGGTGAAGTTGCCTATTCATGCTGTTTAGTGTTGTACATTTGCTTTTAGGGATTTGACGAAGGAAGATAAAGCAGATGTTAATCAGAGCAACTTCTACCCATGtccagtttgttttatctgcctTTTCTTTTGAATTTGTATCATCACTGCCTGAGCTTCAAATGTGACCAgcattgtaaaattaaaaaaaatatatatctataaataaataacagaggcAGTGGATTTGGGTATCTCTATTAGTTGGATATGTTTGTAAAGATGTATATGTTAGATATTTCTATTTGTAACATGCTAGCAATATGTAAAGTATTGTGCCAGGCTTGTGATATTTTGGGTTAAAacgtatgtgaatgagtgtaaataataataataaaaaaataaataattatgattactataaatgaatacaaacaatcaaaaaatagCCCTGATATTTTTCTGTTCTGCATCCTATGACAAATACTTTGGAAATGCAGGAaaggatttaaaaataaatgagtttatAAAGATACATTTGTATATTAAATCAATTCATGATTCATGTTAGCCCTTTGTTTGTCTAACAGTACAGAAAGGGTTAAATGTAGGATTCTAAATAATAGTTTGTCTTATATTGTTTGCAGTTTTTGCCTTAAGTGATAGATGATATTTCTGGCTGGACACCTGTATAAATTTTTTCTGccgcatttttaataaaatatcacAGTATTTTCTAAAATTGTGTCTTCAGATTTATTGACTTTTCCAGCCTTGATGGAAAACCTGATTTGCCCCCAGGGTGGTGAAACAAAGCTAAGCGATTATATTTAATCctcaaaaaagtacatttgaagaAAGAACATATGAATGCTAAAAATTATCATCCCAAAGGTTTTGACgcttttattcaaattattattttgttcagtGTCACTGCTTAGTGTACATGTTAATTGTAgattatctttatttaaaaaggtaatcATTTTTATGATTGTTACAAGATAAGCTGATGACCTTTGTTCTTTGAAAAGTTCATAATAATGTCAAAGCCAAATTACTTAGACAGTAGTTATGCATGCATTTTACATAATTATCTTGCTTGTTATGTTTCTTGCAAAGTACGgccttcatttatttttgagaagagaaaaaaatgaaataatctaatgttacaaacaacaacaacaacaacaacaaaacaaataaagctaTATTATTTAGTCACTGACTTATATATTACATCCATGTACGAATAAACAAACAGGAATGCACGTTATTGAATTTCCAATGCCCACCATCCCTCTTGACAAGTGATGTGAACAATATTTCTC
>TCONS_00000659
cTAGTCAGTGCTGCCTCTTTCTATGGAGACAATCAGATTCTCTACAATTTACTGTTCCTCCGCAGTGATTTCAATGAATTACCTTAATCTATGTGGGTCATTTACATCAGATATGTTGCCGCGTCTCAGCTGAACAGTCCTCGGTGTGCAAGCTTTCCCTCGGACGGCAGCATCACGTTGGATTTTAACAGGGGCAGAACGGAGTTTGATTTTTCCCTTGTGTGGCACATACATTTTGACCGTACCTCTGGAAGTCGTGCGTCAGGATAGAAGCCGTACAATGCAGATACCGCAAAGGGAAACTACAAAAGGAGGAATTGAAAGGAGGGAGTAGTTGCACCAGAGCACAGCTCAGGGGGGAAAGAGCTGCATTTTGTTTTCTCGTCTAAAGCATAGAAGTCCAGAACAACAAGAATATAAGAGATACAGAATCGCCCTCATGGCATGGGGGAATGCCATGATCGTTGATCAGATTGGAGGGTGTGCTGTCAATCATCTGTCCATTGCAGCCTGAAGTCTGGGTTGTACCTTGGCTTTGGAGGAGTGGAGGACTTTGAATTCAAGCAACTCTGCCAACCGCAGCTGGACCATGTCACGGCTCAGAGGAACCCCATGGATACCACTTACCATGGTTCATCCGCTGGCTACTCTACGCCTTTTTACCTGGATTGTGCTTGCGGCTGCGTGGCTGGCCATTACATGGGCTCAGCAGCACCCTATTGTTACGACAAACTATGGCAAGCTAAGAGGCTTGAAAACACCTCTGCCCAATGAGATTCTAGGGCCCGTGGAACAGTATTTGGGGATCCCCTATGCCCTGCCGCCCACAGGAGAAAGAAGGTTTCAGCCCCCAGAGCCTCCAATGTCCTGGCCAGGGATTCGAAATGCTACACAGTTTGCTCCTGTTTGTCCTCAGTTTCTGGAAGATCGTTTTTTACTCAATGATATGTTACCCGTGTGGTTCACCGCCAACTTGGATACTGTTGTAACCTACGTACAAGATCAAAGTGAAGACTGCctgtacttaaacatttatgTTCCTACAGAAGACGACATCCATGATGAGAATGGACTGAGACCTGTTATGGTGTACATCCATGGTGGATCCTACATGGAAGGAACAGGGAATATGATTGACGGCAGTATTCTAGCCAGCTATGGAAACGTCATTGTAGTGACCCTGAACTATAGGCTGGGAGTGCTGGGGTTCCTGAGTACAGGTGACCAGGCAGCCAAAGGGAATTATGGGCTGTTGGACCAGATCCAAGCACTGCGGTGGATCAAAGAGAATATCCAGGCTTTCAAAGGCGACCCGAAAAGGGTGACTATATTTGGATCAGGAGCTGGGGCGTCCTGTGTTAGCTTGCTGACCCTATCACACTATTCAGAAGATTTGTTTCAGAAAGCCATCATCCAGAGTGGGACTGCTCTGTCTAGCTGGGCCGTCAACTACCAGCCTGCCAAATACACCCGGATACTAGCTGAGAAAGTGGGCTGTAATATGCTAGATAGCATAGACCTGGTggaatgtctacagaacaagaaCTACAAGGAGCTGATTGAACAGTACATAACACAAGCCAAGTACCACATTGCGTTTGGTCCAGTAATTGACGGTGACGTCATCCCAGATGACCCCCAAATTCTGATGGAGCAAGGGGAGTTCCTCAACTATGACATCATGCTGGGTGTTAACCAGGGTGAGGGTTTTAAGTTTGTGGATGGCATCGTGGACAGTGAGGATGGTGTGTCTGCAAATGACTTTGACTTCGCCGTGTCTGATTTTGTGGACCATCTTTATGGTTATCCAGAGGGCAAGGACACGCTTCGAGAAACCATCAAGTTCATGTATACTGACTGGGCTGACAAGGAGAACCCGGAGACCAGGCGAAAGACTCTAGTTGCACTTTTCACTGATCACCAATGGGTGGCGCCAGCAGTAGCTACAGCAGACCTTCATGCTCAATATGGATCTCCaacatatttttatgctttttaccATCATTGTCAGAGTGAAATGAAACCTAGCTGGTCGGATTCAGCACACGGAGACGAGGTGCCTTATGTGTTTGGAATTCCCATGCTTGGCCCCACTGATCTCTTTAATTGTAATTTCTCCAAGAATGATGTCATGCTTTCGGCGGTGGTGATGACGTACTGGACAAATTTCGCTAAAACTGGGGATCCGAACCAGCCAGTTCCACAGGACACCAAATTCATACACACAAAGCCCAACCGCTTTGAGGAAGTAGCCTGGTCGAAATACAACCCCAAAGACCAGCTTTACTTACACATCGGACTGAAGCCAAGGGTGAGAGATCACTATCGCGCCACCAAGGTTGCTTTCTGGTTAGAACTGGTACCTCATCTCCATAACATCAACGAACTCTTTCAGTATGTCTCGACCACTACAAAGATACCTCCTCAGGATACTACACCTTTCCCATACACTAAACGACTAGGTAAAACATGGCCATCCACCACACGACACCCTGGTGTTCCTCCTGCCAACACCAAACAAACCACAGACCAGCGTAAAGGCAATGATTTGAGTGATGACTCAGCAGTGGTTATCGAGACAAAGCGCGATTACTCGACCGAACTCAGTGTGACCATAGCAGTAGGTGCTTCTCTCCTTTTCCTCAACATTCTGGCATTCGCAGCGCTCTACTACAAGAAGGATAAACGTCGACATGAATCCAACCGACGAGGACCAAGCCCGCAGCGGAACTCTGCGCCAGCTAATGTGGTGGCTAACGCTAATGACATAGCACATTTGCAGAGTGATGAGCTGATGTCACTTCAGATGAAACAGCAGCAGATGGAACACGAGCACCATCATGAGTGCGATTCTTTACAAGCTCACGATACGCTTCGTCTTACCTGCCCGGCTGATTATACGCTTACCCTGCGACGTTCACCTGATGACATCCCACTCATGACGCCAAGTACCATAACAATGATTCCTAACACTCTGGCCGGAATGCAGACCCTGCACAATTTCAACACATTCGGAGGCAGTCAGAACAGTACCAACTTGCCCCATGGGCATTCCACCACCAGGGtatagcttctttttttttttagaactacaGAACATGGTCTGCTAAGGCAGTGGGGGATAAAGGACCTTTGTTTGTTATGGCAAACTGTGCTGACTTTGTTCCACTCTGAGACTTATCATGGTGGATGAGATGTTATTTTCCTATGAAGCCTTCTTGCAGAATATATCAAAGTCAAATATGACCTacttgcgaaaaaaaaaaaaaaatgaatgttacTAGAGTAATACTTTATTTGGAGCCAAGCTTGTTAAGGGCAGGGGACTTTACACCAAAAGATAAGAAGAACTCTTTCTGAAAGACTATTTTGCTTGCGTAGAAAACATATACACCAACAACAGAGAGGATCTGATGATGCTTTGTATGTGCCATAACTTGTCATATACCATGAGCAACAATGAGAGCAATGTTATTATGTGAGAGCTATATTTCCgatacacacattattattattttctgagaGCTTTGTCACATAATGAACATGTGGACTGAACTTAAAAATCCCAGCCTGAAATGTAATTATGACAAAATTTGTAAAGGTGACATAATGTACATACTTGTGAGtcaaatagaaatattaaaagaATTACAAAAGCTTTTATTGTTGTTTAGTTCAAAATATGACTATTAATGAGCTTACGCTTCTGTTAAGGtgtatgtaaataaatcaatcattatcttttgttttgttttgcttttttttggaaTCATGTCTGTGCTTAACAGCTTTTAAAATCAAGAAAAGAAATAAAGGAGAAGACAGTATTATTATTCCAAAGCCTCTAAGTATCCATTTCAGTCATTTAAGTGTTCCTTTGTCCCaatgtttgacaaatattgcatgTTTGATTGCTGCTTTACATTTGATAACCTCATACCGTGACCCCATGCGGATGTTAAAAATGAAAGATTGCTTCTAATTACATTACAGTGCTGGGTGAAGTTGCCTATTCATGCTGTTTAGTGTTGTACATTTGCTTTTAGGGATTTGACGAAGGAAGATAAAGCAGATGTTAATCAGAGCAACTTCTACCCATGtccagtttgttttatctgcctTTTCTTTTGAATTTGTATCATCACTGCCTGAGCTTCAAATGTGACCAgcattgtaaaattaaaaaaaatatatatctataaataaataacagaggcAGTGGATTTGGGTATCTCTATTAGTTGGATATGTTTGTAAAGATGTATATGTTAGATATTTCTATTTGTAACATGCTAGCAATATGTAAAGTATTGTGCCAGGCTTGTGATATTTTGGGTTAAAacgtatgtgaatgagtgtaaataataataataaaaaaataaataattatgattactataaatgaatacaaacaatcaaaaaatagCCCTGATATTTTTCTGTTCTGCATCCTATGACAAATACTTTGGAAATGCAGGAaaggatttaaaaataaatgagtttatAAAGATACATTTGTATATTAAATCAATTCATGATTCATGTTAGCCCTTTGTTTGTCTAACAGTACAGAAAGGGTTAAATGTAGGATTCTAAATAATAGTTTGTCTTATATTGTTTGCAGTTTTTGCCTTAAGTGATAGATGATATTTCTGGCTGGACACCTGTATAAATTTTTTCTGccgcatttttaataaaatatcacAGTATTTTCTAAAA
>TCONS_00000660
ATGTCACGGCTCAGAGGAACCCCATGGATACCACTTACCATGGTTCATCCGCTGGCTACTCTACGCCTTTTTACCTGGATTGTGCTTGCGGCTGCGTGGCTGGCCATTACATGGGCTCAGCAGCACCCTATTGTTACGACAAACTATGGCAAGCTAAGAGGCTTGAAAACACCTCTGCCCAATGAGATTCTAGGGCCCGTGGAACAGTATTTGGGGATCCCCTATGCCCTGCCGCCCACAGGAGAAAGAAGGTTTCAGCCCCCAGAGCCTCCAATGTCCTGGCCAGGGATTCGAAATGCTACACAGTTTGCTCCTGTTTGTCCTCAGTTTCTGGAAGATCGTTTTTTACTCAATGATATGTTACCCGTGTGGTTCACCGCCAACTTGGATACTGTTGTAACCTACGTACAAGATCAAAGTGAAGACTGCctgtacttaaacatttatgTTCCTACAGAAGACGGAGCCAACAAAGGCGATGATTTCACCAATAATGAGGGTGGCGAAAATAAAGACATCCATGATGAGAATGGACTGAGACCTGTTATGGTGTACATCCATGGTGGATCCTACATGGAAGGAACAGGGAATATGATTGACGGCAGTATTCTAGCCAGCTATGGAAACGTCATTGTAGTGACCCTGAACTATAGGCTGGGAGTGCTGGGGTTCCTGAGTACAGGTGACCAGGCAGCCAAAGGGAATTATGGGCTGTTGGACCAGATCCAAGCACTGCGGTGGATCAAAGAGAATATCCAGGCTTTCAAAGGCGACCCGAAAAGGGTGACTATATTTGGATCAGGAGCTGGGGCGTCCTGTGTTAGCTTGCTGACCCTATCACACTATTCAGAAGATTTGTTTCAGAAAGCCATCATCCAGAGTGGGACTGCTCTGTCTAGCTGGGCCGTCAACTACCAGCCTGCCAAATACACCCGGATACTAGCTGAGAAAGTGGGCTGTAATATGCTAGATAGCATAGACCTGGTggaatgtctacagaacaagaaCTACAAGGAGCTGATTGAACAGTACATAACACAAGCCAAGTACCACATTGCGTTTGGTCCAGTAATTGACGGTGACGTCATCCCAGATGACCCCCAAATTCTGATGGAGCAAGGGGAGTTCCTCAACTATGACATCATGCTGGGTGTTAACCAGGGTGAGGGTTTTAAGTTTGTGGATGGCATCGTGGACAGTGAGGATGGTGTGTCTGCAAATGACTTTGACTTCGCCGTGTCTGATTTTGTGGACCATCTTTATGGTTATCCAGAGGGCAAGGACACGCTTCGAGAAACCATCAAGTTCATGTATACTGACTGGGCTGACAAGGAGAACCCGGAGACCAGGCGAAAGACTCTAGTTGCACTTTTCACTGATCACCAATGGGTGGCGCCAGCAGTAGCTACAGCAGACCTTCATGCTCAATATGGATCTCCaacatatttttatgctttttaccATCATTGTCAGAGTGAAATGAAACCTAGCTGGTCGGATTCAGCACACGGAGACGAGGTGCCTTATGTGTTTGGAATTCCCATGCTTGGCCCCACTGATCTCTTTAATTGTAATTTCTCCAAGAATGATGTCATGCTTTCGGCGGTGGTGATGACGTACTGGACAAATTTCGCTAAAACTGGGGATCCGAACCAGCCAGTTCCACAGGACACCAAATTCATACACACAAAGCCCAACCGCTTTGAGGAAGTAGCCTGGTCGAAATACAACCCCAAAGACCAGCTTTACTTACACATCGGACTGAAGCCAAGGGTGAGAGATCACTATCGCGCCACCAAGGTTGCTTTCTGGTTAGAACTGGTACCTCATCTCCATAACATCAACGAACTCTTTCAGTATGTCTCGACCACTACAAAGATACCTCCTCAGGATACTACACCTTTCCCATACACTAAACGACTAGGTAAAACATGGCCATCCACCACACGACACCCTGGTGTTCCTCCTGCCAACACCAAACAAACCACAGACCAGCGTAAAGGCAATGATTTGAGTGATGACTCAGCAGTGGTTATCGAGACAAAGCGCGATTACTCGACCGAACTCAGTGTGACCATAGCAGTAGGTGCTTCTCTCCTTTTCCTCAACATTCTGGCATTCGCAGCGCTCTACTACAAGAAGGATAAACGTCGACATGAATCCAACCGACGAGGACCAAGCCCGCAGCGGAACTCTGCGCCAGCTAATGTGGTGGCTAACGCTAATGACATAGCACATTTGCAGAGTGATGAGCTGATGTCACTTCAGATGAAACAGCAGCAGATGGAACACGAGCACCATCATGAGTGCGATTCTTTACAAGCTCACGATACGCTTCGTCTTACCTGCCCGGCTGATTATACGCTTACCCTGCGACGTTCACCTGATGACATCCCACTCATGACGCCAAGTACCATAACAATGATTCCTAACACTCTGGCCGGAATGCAGACCCTGCACAATTTCAACACATTCGGAGGCAGTCAGAACAGTACCAACTTGCCCCATGGGCATTCCACCACCAGGGtatag

Function

symbol description
nlgn4xa Predicted to enable neurexin family protein binding activity and signaling receptor activity. Predicted to be involved in several processes, including neuron cell-cell adhesion; synapse assembly; and synaptic vesicle endocytosis. Predicted to act upstream of or within cell adhesion. Predicted to be located in cell junction and plasma membrane. Predicted to be integral component of membrane. Predicted to be active in cell surface and synapse. Predicted to be integral component of plasma membrane. Is expressed in several structures, including brain; eye; gonad; spinal cord interneuron; and swim bladder. Human ortholog(s) of this gene implicated in Asperger syndrome and autistic disorder. Orthologous to several human genes including NLGN4X (neuroligin 4 X-linked).

GO:

id name namespace
GO:0048488 synaptic vesicle endocytosis biological_process
GO:0097104 postsynaptic membrane assembly biological_process
GO:0097105 presynaptic membrane assembly biological_process
GO:0007268 chemical synaptic transmission biological_process
GO:0050804 modulation of chemical synaptic transmission biological_process
GO:0007158 neuron cell-cell adhesion biological_process
GO:0045202 synapse cellular_component
GO:0005887 integral component of plasma membrane cellular_component
GO:0009986 cell surface cellular_component
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0038023 signaling receptor activity molecular_function
GO:0042043 neurexin family protein binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-100309-2 Predicted to enable neurexin family protein binding activity and signaling receptor activity. Predicted to be involved in several processes, including neuron cell-cell adhesion; synapse assembly; and synaptic vesicle endocytosis. Predicted to act upstream of or within cell adhesion. Predicted to be located in cell junction and plasma membrane. Predicted to be integral component of membrane. Predicted to be active in cell surface and synapse. Predicted to be integral component of plasma membrane. Is expressed in several structures, including brain; eye; gonad; spinal cord interneuron; and swim bladder. Human ortholog(s) of this gene implicated in Asperger syndrome and autistic disorder. Orthologous to several human genes including NLGN4X (neuroligin 4 X-linked).

Ensembl:

ensembl_id ENSDARG00000079455

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00000658 False 5478 mRNA 0.41 7 32521469 32693950
TCONS_00000659 False 4719 mRNA 0.42 6 32521579 32693355
TCONS_00000660 True 2532 mRNA 0.48 6 32528097 32691706

Neighbor

gene id symbol gene type direction distance location
XLOC_000386 CU462859.1 coding upstream 7365 32513989 ~ 32514104 (+)
XLOC_000385 pudp coding upstream 135804 32341484 ~ 32385665 (+)
XLOC_000384 sts coding upstream 443996 32051581 ~ 32077473 (+)
XLOC_000383 BX901898.1 coding upstream 503354 32017437 ~ 32018115 (+)
XLOC_000382 BX901898.2 coding upstream 506982 32013688 ~ 32014487 (+)
XLOC_000388 CU915272.1 coding downstream 12159 32706109 ~ 32706227 (+)
XLOC_000389 zgc:174320 coding downstream 97970 32791920 ~ 32793644 (+)
XLOC_000390 BX322647.1 coding downstream 521291 33215241 ~ 33216718 (+)
XLOC_000391 prkx coding downstream 523961 33217911 ~ 33283689 (+)
XLOC_000392 mxra5a coding downstream 628224 33322174 ~ 33334732 (+)
XLOC_000381 NA non-coding upstream 509091 32011880 ~ 32012378 (+)
XLOC_000380 NA non-coding upstream 509675 32010262 ~ 32011794 (+)
XLOC_000371 CT573247.1 non-coding upstream 1000497 31519239 ~ 31520972 (+)
XLOC_000394 NA non-coding downstream 823852 33517802 ~ 33518823 (+)
XLOC_000400 CU915566.1 non-coding downstream 1041068 33735018 ~ 33735134 (+)
XLOC_000401 CT573012.1 non-coding downstream 1273207 33967157 ~ 33967273 (+)

Expression


Co-expression Network