G1981824



Basic Information


Item Value
gene id G1981824
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 39292536 ~ 39294353 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2265554
gataaaccctgaccctaatggtcgactatcaagacaaaaccaatggaaaatgaaaaaaggatcaatgatggctagaagaccggtgacgtcgaacgccgagcaccgcccgaacaaggagaggcaacgacttcggcagaagtcgtgacaaatgCAGCAATTTGCTTCAATACCCTATATTTTTTTCCATATCTTTGCATGTAGTCATTTCCttgtgaaaaataaaatgttgaaCAAAATAATAATTCCTGAAAATCCAGGgatgcaaaaaaaaacatgtgtagtacaacactcctgctgtacagtactgtgagggttctagttctcatcaacatgtatagtataatcactcatactgtacagtactgtgagggttcttgttctcatcaacatgtatagtataatcactcatactgtacagtactgtgagggttctagttctcatcaacatgtatagtataacactcatactgtacagtactgtgagggttcttgttctcatcaacatgtatagtataatcactcatactgtacagtactgtgagggttctagttctcatcaacatgtacagtataacactcatactgtacagtactgtgagggttctggttctcatcaacatgtataacactcatactgtacagtactgtgagggttctagttcgcatcaacatgtatagtataatcactcatactgtacagtactgtgagggttctagttctcatcaacatgtatagtataatcactcatactgtacagtactgtgagggttctagttctcatcaacatgtatagtataacactcatactgtacagtactgtgagggttctagttctcatcaacatgtatagtataatcactcatactgtacagtactgtgagggttctggttctgatcaacatgtgtagtacaacactcctactgtacagtactgtgagggttctagttctcatcaacatgtatagtataatcactcatactgtacagtactgtgagggttctggttctgatcaacatgtgtagtacaacactcctactgtacagtactgtgagggttcttgttctcatcaacatgtatagtataatcactcatactgtacagtactgtgagggttctagttctcatcaacatgtatagtataacactcctactgtacagttctgtgagggttctagttctcatcaacatgtatagtataatcactcctactatacagtactgtgagggttctagttctcatcaacatgtatagtataatcactcatactgtacagttctGTGAGGAttctagttctccctctctctgcatttgGCCACAAGTTCTTATCAACATCACATCTTATGTCTTCTCTGGCG

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2265554 True 1358 lncRNA 0.39 3 39292536 39294353

Neighbor


gene id symbol gene type direction distance location
LOC110505895 nrxn3 coding downstream 44353 38629768 ~ 39248183 (-)
LOC118944132 NA coding downstream 791227 38467126 ~ 38523197 (-)
LOC118944133 NA coding downstream 793023 38497981 ~ 38499513 (-)
LOC110504248 LOC106592147 coding downstream 852062 38388826 ~ 38440474 (-)
LOC110504246 LOC106611364 coding downstream 1376650 37907969 ~ 37915886 (-)
LOC110505899 LOC106611374 coding upstream 130112 39424465 ~ 39427601 (-)
LOC110505906 LOC106603387 coding upstream 673534 39967887 ~ 39980053 (-)
LOC110505909 cd93 coding upstream 693482 39987835 ~ 39990813 (-)
LOC118944315 NA coding upstream 843073 40137426 ~ 40140566 (-)
tpo tpo coding upstream 853591 40147944 ~ 40173204 (-)
G1981797 NA non-coding downstream 37761 39253953 ~ 39254775 (-)
G1981780 NA non-coding downstream 63135 39226558 ~ 39229401 (-)
G1981776 NA non-coding downstream 67710 39224395 ~ 39224826 (-)
G1981753 NA non-coding downstream 114624 39177701 ~ 39177912 (-)
G1981750 NA non-coding downstream 124045 39168225 ~ 39168491 (-)
G1981935 NA non-coding upstream 199220 39493573 ~ 39494049 (-)
G1981944 NA non-coding upstream 210007 39504360 ~ 39505879 (-)
G1981963 LOC106611388 non-coding upstream 258993 39553346 ~ 39554008 (-)
G1981964 NA non-coding upstream 262267 39556620 ~ 39569809 (-)
G1981971 NA non-coding upstream 276204 39570557 ~ 39570786 (-)
G1981678 NA other downstream 253592 39036287 ~ 39038944 (-)
G1980619 LOC106611366 other downstream 1088373 38203441 ~ 38204163 (-)
G1979813 NA other downstream 1953654 37337746 ~ 37338882 (-)
G1979607 NA other downstream 2326817 36965174 ~ 36965719 (-)
LOC110504237 LOC106611328 other downstream 2945481 36325431 ~ 36370245 (-)
G1982029 NA other upstream 325512 39619865 ~ 39620209 (-)
G1982657 emilin1 other upstream 557830 39852183 ~ 39858120 (-)
G1982679 NA other upstream 590733 39885086 ~ 39905809 (-)
G1982769 NA other upstream 753673 40048026 ~ 40063881 (-)

Expression



Co-expression Network