Gene
RNA
| Item | Value |
|---|---|
| gene id | G1981935 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 39493573 ~ 39494049 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2265671 | False | 438 | lncRNA | 0.39 | 2 | 39493573 | 39494049 |
| TU2265673 | True | 399 | lncRNA | 0.39 | 2 | 39493573 | 39494049 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505899 | LOC106611374 | coding | downstream | 65972 | 39424465 ~ 39427601 (-) |
| LOC110505895 | nrxn3 | coding | downstream | 245390 | 38629768 ~ 39248183 (-) |
| LOC118944132 | NA | coding | downstream | 992264 | 38467126 ~ 38523197 (-) |
| LOC118944133 | NA | coding | downstream | 994060 | 38497981 ~ 38499513 (-) |
| LOC110504248 | LOC106592147 | coding | downstream | 1053099 | 38388826 ~ 38440474 (-) |
| LOC110505906 | LOC106603387 | coding | upstream | 473838 | 39967887 ~ 39980053 (-) |
| LOC110505909 | cd93 | coding | upstream | 493786 | 39987835 ~ 39990813 (-) |
| LOC118944315 | NA | coding | upstream | 643377 | 40137426 ~ 40140566 (-) |
| tpo | tpo | coding | upstream | 653895 | 40147944 ~ 40173204 (-) |
| LOC110505924 | LOC106606698 | coding | upstream | 682806 | 40176855 ~ 40236490 (-) |
| G1981824 | NA | non-coding | downstream | 199220 | 39292536 ~ 39294353 (-) |
| G1981797 | NA | non-coding | downstream | 238798 | 39253953 ~ 39254775 (-) |
| G1981780 | NA | non-coding | downstream | 264172 | 39226558 ~ 39229401 (-) |
| G1981776 | NA | non-coding | downstream | 268747 | 39224395 ~ 39224826 (-) |
| G1981753 | NA | non-coding | downstream | 315661 | 39177701 ~ 39177912 (-) |
| G1981944 | NA | non-coding | upstream | 10311 | 39504360 ~ 39505879 (-) |
| G1981963 | LOC106611388 | non-coding | upstream | 59297 | 39553346 ~ 39554008 (-) |
| G1981964 | NA | non-coding | upstream | 62571 | 39556620 ~ 39569809 (-) |
| G1981971 | NA | non-coding | upstream | 76508 | 39570557 ~ 39570786 (-) |
| G1981983 | NA | non-coding | upstream | 82018 | 39576067 ~ 39576448 (-) |
| G1981678 | NA | other | downstream | 454629 | 39036287 ~ 39038944 (-) |
| G1980619 | LOC106611366 | other | downstream | 1289410 | 38203441 ~ 38204163 (-) |
| G1979813 | NA | other | downstream | 2154691 | 37337746 ~ 37338882 (-) |
| G1979607 | NA | other | downstream | 2527854 | 36965174 ~ 36965719 (-) |
| LOC110504237 | LOC106611328 | other | downstream | 3146518 | 36325431 ~ 36370245 (-) |
| G1982029 | NA | other | upstream | 125816 | 39619865 ~ 39620209 (-) |
| G1982657 | emilin1 | other | upstream | 358134 | 39852183 ~ 39858120 (-) |
| G1982679 | NA | other | upstream | 391037 | 39885086 ~ 39905809 (-) |
| G1982769 | NA | other | upstream | 553977 | 40048026 ~ 40063881 (-) |
