Gene
RNA
| Item | Value |
|---|---|
| gene id | G1981944 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 39504360 ~ 39505879 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2265682 | True | 264 | lncRNA | 0.50 | 3 | 39504360 | 39505879 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505899 | LOC106611374 | coding | downstream | 76759 | 39424465 ~ 39427601 (-) |
| LOC110505895 | nrxn3 | coding | downstream | 256177 | 38629768 ~ 39248183 (-) |
| LOC118944132 | NA | coding | downstream | 1003051 | 38467126 ~ 38523197 (-) |
| LOC118944133 | NA | coding | downstream | 1004847 | 38497981 ~ 38499513 (-) |
| LOC110504248 | LOC106592147 | coding | downstream | 1063886 | 38388826 ~ 38440474 (-) |
| LOC110505906 | LOC106603387 | coding | upstream | 462008 | 39967887 ~ 39980053 (-) |
| LOC110505909 | cd93 | coding | upstream | 481956 | 39987835 ~ 39990813 (-) |
| LOC118944315 | NA | coding | upstream | 631547 | 40137426 ~ 40140566 (-) |
| tpo | tpo | coding | upstream | 642065 | 40147944 ~ 40173204 (-) |
| LOC110505924 | LOC106606698 | coding | upstream | 670976 | 40176855 ~ 40236490 (-) |
| G1981935 | NA | non-coding | downstream | 10311 | 39493573 ~ 39494049 (-) |
| G1981824 | NA | non-coding | downstream | 210007 | 39292536 ~ 39294353 (-) |
| G1981797 | NA | non-coding | downstream | 249585 | 39253953 ~ 39254775 (-) |
| G1981780 | NA | non-coding | downstream | 274959 | 39226558 ~ 39229401 (-) |
| G1981776 | NA | non-coding | downstream | 279534 | 39224395 ~ 39224826 (-) |
| G1981963 | LOC106611388 | non-coding | upstream | 47467 | 39553346 ~ 39554008 (-) |
| G1981964 | NA | non-coding | upstream | 50741 | 39556620 ~ 39569809 (-) |
| G1981971 | NA | non-coding | upstream | 64678 | 39570557 ~ 39570786 (-) |
| G1981983 | NA | non-coding | upstream | 70188 | 39576067 ~ 39576448 (-) |
| G1981986 | LOC106611386 | non-coding | upstream | 76691 | 39582570 ~ 39583801 (-) |
| G1981678 | NA | other | downstream | 465416 | 39036287 ~ 39038944 (-) |
| G1980619 | LOC106611366 | other | downstream | 1300197 | 38203441 ~ 38204163 (-) |
| G1979813 | NA | other | downstream | 2165478 | 37337746 ~ 37338882 (-) |
| G1979607 | NA | other | downstream | 2538641 | 36965174 ~ 36965719 (-) |
| LOC110504237 | LOC106611328 | other | downstream | 3157305 | 36325431 ~ 36370245 (-) |
| G1982029 | NA | other | upstream | 113986 | 39619865 ~ 39620209 (-) |
| G1982657 | emilin1 | other | upstream | 346304 | 39852183 ~ 39858120 (-) |
| G1982679 | NA | other | upstream | 379207 | 39885086 ~ 39905809 (-) |
| G1982769 | NA | other | upstream | 542147 | 40048026 ~ 40063881 (-) |
