G1982679


Basic Information

Item Value
gene id G1982679
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 39885086 ~ 39905809 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2266638
gatttttgcaattcgttccagtcatgaactactgaatataagatcagcgtcaactcaccatcagtacgaccaagaatatgtttttcgcgacgcggatcctgtgttctgccttacaaacaggacaatggagtggatcccatgcagcgacccaaaaaaacgactccgaaaaagagggaaacgaggcggtcttctggtcagactccggagacgggcacaccgtgcaccattccctagcattcttcttgccaatgtccagtctcttgacaacaaggttgatgaaatccgagcaagggtagcattccagagggacatcagagactgtaacgttctttgcttcacggaaacgtggcttactggagagacgctatccgaggcggtgcagccaacaggtttctccacgcatcgcgcagacagaaacaaacatctttctggtaagaagaggggcgggggcgtatgccttatgactaacgtgacatggtgtgatgaaagaaacatacaggaactcaaatccttctgttcacctgatttagaattcctcacaatcaaatgtagaccgca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2266638 True 558 TUCP 0.48 2 39885086 39905809

Neighbor

gene id symbol gene type direction distance location
LOC110505899 LOC106611374 coding downstream 457485 39424465 ~ 39427601 (-)
LOC110505895 nrxn3 coding downstream 636903 38629768 ~ 39248183 (-)
LOC118944132 NA coding downstream 1383777 38467126 ~ 38523197 (-)
LOC118944133 NA coding downstream 1385573 38497981 ~ 38499513 (-)
LOC110504248 LOC106592147 coding downstream 1444612 38388826 ~ 38440474 (-)
LOC110505906 LOC106603387 coding upstream 62078 39967887 ~ 39980053 (-)
LOC110505909 cd93 coding upstream 82026 39987835 ~ 39990813 (-)
LOC118944315 NA coding upstream 231617 40137426 ~ 40140566 (-)
tpo tpo coding upstream 242135 40147944 ~ 40173204 (-)
LOC110505924 LOC106606698 coding upstream 271046 40176855 ~ 40236490 (-)
G1982657 emilin1 non-coding downstream 26966 39852183 ~ 39858120 (-)
G1982578 NA non-coding downstream 203218 39678392 ~ 39681868 (-)
G1982069 NA non-coding downstream 217136 39667731 ~ 39667950 (-)
G1982060 NA non-coding downstream 228339 39656542 ~ 39656747 (-)
G1982057 NA non-coding downstream 229999 39654614 ~ 39655087 (-)
G1982689 NA non-coding upstream 1094 39906903 ~ 39910419 (-)
G1982726 NA non-coding upstream 80878 39986687 ~ 39987198 (-)
G1982734 NA non-coding upstream 98421 40004230 ~ 40004438 (-)
G1982739 NA non-coding upstream 104842 40010651 ~ 40010875 (-)
G1982029 NA other downstream 264877 39619865 ~ 39620209 (-)
G1981964 NA other downstream 315277 39556620 ~ 39569809 (-)
G1981678 NA other downstream 846142 39036287 ~ 39038944 (-)
G1980619 LOC106611366 other downstream 1680923 38203441 ~ 38204163 (-)
G1982769 NA other upstream 142217 40048026 ~ 40063881 (-)
G1983003 NA other upstream 651489 40557298 ~ 40558989 (-)
LOC110504262 ect2l other upstream 1035098 40917719 ~ 40944573 (-)
G1983374 NA other upstream 1284159 41189968 ~ 41197087 (-)
G1983984 NA other upstream 1831766 41737575 ~ 41739066 (-)

Expression


Co-expression Network