G1982355


Basic Information

Item Value
gene id G1982355
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 40389658 ~ 40390407 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2266230
gggatgctggcccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggcccatgttgactctacaaggtgtcgaaagcgttccacaggtatgctggtccatgttgactctacacggtgttgaaagtgttccacagggatgctggcccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggtccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggtccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggcccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggtccatgttgactctacaaggtgttgaaagcgttccacagggatgctggcccatgttgactctacaaggtgttgaaagcgttccacagggatgctggcccatgttgactctacaaggtgtcgaaagcgttccacctactaccataccc
>TU2266233
gggatgctggcccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggcccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggtccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggcccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggtccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggcccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggtccatgttgactctacaaggtgttgaaagcgttccacagggatgctggcccatgttgactctacaaggtgttgaaagcgttccacagggatgctggcccatgttgactctacaaggtgtcgaaagcgttccacctactaccataccc
>TU2266234
gggatgctggcccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggcccatgttgactctacaaggtgtcgaaagcgttccacaggtatgctggtccatgttgactctacacggtgttgaaagtgttccacagggatgctggcccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggtccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggtccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggtccatgttgactctacaaggtgttgaaagcgttccacagggatgctggcccatgttgactctacaaggtgttgaaagcgttccacagggatgctggcccatgttgactctacaaggtgtcgaaagcgttccacagggatgctggcccatgttgactctacaaggtgttgaaagtgttccacagggatgctggcccatgttgactccgatgcttcccac

Function

NR:

description
PREDICTED: trans-Golgi network integral membrane protein 2-like isoform X5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2266230 False 493 TUCP 0.53 3 40389658 40390407
TU2266233 False 445 TUCP 0.53 3 40389658 40390407
TU2266234 True 516 TUCP 0.53 3 40389658 40390269

Neighbor

gene id symbol gene type direction distance location
LOC110505920 LOC106611413 coding upstream 25489 40356100 ~ 40364169 (+)
LOC110505913 LOC106611411 coding upstream 33700 40341646 ~ 40355958 (+)
LOC110505914 LOC106611394 coding upstream 79068 40292623 ~ 40310590 (+)
LOC118944373 NA coding upstream 97598 40290835 ~ 40292060 (+)
LOC110505912 LOC106611380 coding upstream 295586 40063662 ~ 40094072 (+)
LOC110505926 LOC106611410 coding downstream 21722 40412129 ~ 40427679 (+)
LOC110505917 LOC106611409 coding downstream 50023 40440430 ~ 40454794 (+)
LOC118944272 NA coding downstream 188261 40578668 ~ 40579658 (+)
snx9a LOC105031565 coding downstream 298781 40689188 ~ 40741739 (+)
pomca LOC100510783 coding downstream 429289 40819696 ~ 40822826 (+)
G1982304 NA non-coding upstream 54307 40334582 ~ 40335351 (+)
G1982298 NA non-coding upstream 55911 40328577 ~ 40333747 (+)
G1982349 NA non-coding upstream 70357 40318221 ~ 40319301 (+)
G1982337 NA non-coding upstream 122633 40266284 ~ 40267025 (+)
G1982289 NA non-coding upstream 180380 40208940 ~ 40209278 (+)
G1982366 NA non-coding downstream 39603 40430010 ~ 40430401 (+)
G1982367 NA non-coding downstream 41605 40432012 ~ 40433321 (+)
G1982403 NA non-coding downstream 135447 40525854 ~ 40526773 (+)
G1982411 NA non-coding downstream 141728 40532135 ~ 40553006 (+)
LOC110505902 LOC106611388 other upstream 836166 39543907 ~ 39557667 (+)
G1981068 NA other upstream 1294844 39036366 ~ 39094814 (+)
LOC110505893 dio2 other upstream 1815298 38565810 ~ 38575881 (+)
G1980792 NA other upstream 1860553 38528607 ~ 38529105 (+)
G1980026 NA other upstream 2659754 37721134 ~ 37729904 (+)
G1983277 NA other downstream 657144 41047551 ~ 41047902 (+)
G1983387 NA other downstream 825068 41215475 ~ 41216752 (+)
LOC110504259 LOC106603281 other downstream 907299 41297432 ~ 41350749 (+)
G1983499 NA other downstream 1057995 41448402 ~ 41449340 (+)
LOC110505959 LOC106611457 other downstream 1349800 41740173 ~ 41757394 (+)

Expression


Co-expression Network