G1983387


Basic Information

Item Value
gene id G1983387
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 41215475 ~ 41216752 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2267517
tctttaagaagtacaccatgctcaaccacaCGATcaacaagactctcttctttaagaagtacaccatgctcaaccatacgatcaacaagacactcttctttaagaagtacgccatgctcaaccatacgatcaacaagactctcttctttaagaagtacaccatgctcaaccatacgatcaacaagacactcttctttaagaagtacaccatgctcaaccatacgatctacaaggtgctcttctttaagaagtacaccatgctcaaccatacga

Function

NR:

description
PREDICTED: retinitis pigmentosa 1-like 1 protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2267517 True 273 TUCP 0.41 2 41215475 41216752

Neighbor

gene id symbol gene type direction distance location
si:ch211-132f19.7 LOC106611404 coding upstream 324363 40868101 ~ 40891112 (+)
dnajc27 LOC106611405 coding upstream 355421 40829046 ~ 40860054 (+)
pomca LOC100510783 coding upstream 392649 40819696 ~ 40822826 (+)
snx9a LOC105031565 coding upstream 473736 40689188 ~ 40741739 (+)
LOC118944272 NA coding upstream 635817 40578668 ~ 40579658 (+)
LOC110504259 LOC106603281 coding downstream 80680 41297432 ~ 41350749 (+)
LOC110505965 trim9 coding downstream 330619 41547371 ~ 41622795 (+)
LOC110505964 LOC106611459 coding downstream 419404 41636156 ~ 41666062 (+)
LOC110505960 LOC106611458 coding downstream 460592 41677344 ~ 41737128 (+)
LOC110505959 LOC106611457 coding downstream 523421 41740173 ~ 41757394 (+)
G1983361 NA non-coding upstream 16633 41191975 ~ 41198842 (+)
G1983324 NA non-coding upstream 78749 41114402 ~ 41136726 (+)
G1983320 NA non-coding upstream 105664 41109527 ~ 41109811 (+)
G1983319 NA non-coding upstream 106679 41108489 ~ 41108796 (+)
G1983309 NA non-coding upstream 121046 41094202 ~ 41094429 (+)
G1983391 NA non-coding downstream 3928 41220680 ~ 41245276 (+)
G1983395 NA non-coding downstream 19880 41236632 ~ 41236990 (+)
G1983404 NA non-coding downstream 41752 41258504 ~ 41258796 (+)
G1983420 NA non-coding downstream 95686 41312438 ~ 41312669 (+)
G1983422 NA non-coding downstream 109697 41326449 ~ 41330431 (+)
G1983277 NA other upstream 167573 41047551 ~ 41047902 (+)
G1982355 NA other upstream 825068 40389658 ~ 40390407 (+)
LOC110505902 LOC106611388 other upstream 1661983 39543907 ~ 39557667 (+)
G1981068 NA other upstream 2120661 39036366 ~ 39094814 (+)
LOC110505893 dio2 other upstream 2641115 38565810 ~ 38575881 (+)
G1983499 NA other downstream 231650 41448402 ~ 41449340 (+)
G1983721 NA other downstream 846273 42063025 ~ 42103896 (+)
G1983777 NA other downstream 1015488 42232240 ~ 42232904 (+)

Expression


Co-expression Network