G1983391


Basic Information

Item Value
gene id G1983391
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 41220680 ~ 41245276 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2267522
cactaattatcaaaatccagaaaagagccgttaaattctacaaccacttaaaaggaagtgattcacaaaccttccataacaaagccatcacctacagagagatgaacctggagaagagtcccctaagcaagctggtcctggggctctgttcacaaacacaaacacaccctacagagccccaggaccagcttgcttaggggactcttctccaggttcatctctctgtaggtgatggctttgttatggaaggtttgtgaatcacttccttttaggtggttatagaatttaacggctcttttctggattttgataattagtgggtatcggcctaattctgctctgcatgcattatttggtgttctacgttgtacacggaggatatttttgcagaattctgcgtgcagagtctcaatttggtgtttgtcccattttgtgaagtcttggttggtgagcggaccccagacctcacaaccataaaggacaatgggctctatgactgattcaaatcctaattggtatgttgaaatttatgtttctttctctctctctctctct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2267522 True 555 lncRNA 0.43 2 41220680 41245276

Neighbor

gene id symbol gene type direction distance location
si:ch211-132f19.7 LOC106611404 coding upstream 329568 40868101 ~ 40891112 (+)
dnajc27 LOC106611405 coding upstream 360626 40829046 ~ 40860054 (+)
pomca LOC100510783 coding upstream 397854 40819696 ~ 40822826 (+)
snx9a LOC105031565 coding upstream 478941 40689188 ~ 40741739 (+)
LOC118944272 NA coding upstream 641022 40578668 ~ 40579658 (+)
LOC110504259 LOC106603281 coding downstream 52156 41297432 ~ 41350749 (+)
LOC110505965 trim9 coding downstream 302095 41547371 ~ 41622795 (+)
LOC110505964 LOC106611459 coding downstream 390880 41636156 ~ 41666062 (+)
LOC110505960 LOC106611458 coding downstream 432068 41677344 ~ 41737128 (+)
LOC110505959 LOC106611457 coding downstream 494897 41740173 ~ 41757394 (+)
G1983361 NA non-coding upstream 21838 41191975 ~ 41198842 (+)
G1983324 NA non-coding upstream 83954 41114402 ~ 41136726 (+)
G1983320 NA non-coding upstream 110869 41109527 ~ 41109811 (+)
G1983319 NA non-coding upstream 111884 41108489 ~ 41108796 (+)
G1983309 NA non-coding upstream 126251 41094202 ~ 41094429 (+)
G1983404 NA non-coding downstream 13228 41258504 ~ 41258796 (+)
G1983420 NA non-coding downstream 67162 41312438 ~ 41312669 (+)
G1983422 NA non-coding downstream 81173 41326449 ~ 41330431 (+)
G1983459 NA non-coding downstream 106751 41352027 ~ 41352336 (+)
G1983462 NA non-coding downstream 109803 41355079 ~ 41355421 (+)
G1983387 NA other upstream 3928 41215475 ~ 41216752 (+)
G1983277 NA other upstream 172778 41047551 ~ 41047902 (+)
G1982355 NA other upstream 830273 40389658 ~ 40390407 (+)
LOC110505902 LOC106611388 other upstream 1667188 39543907 ~ 39557667 (+)
G1981068 NA other upstream 2125866 39036366 ~ 39094814 (+)
G1983499 NA other downstream 203126 41448402 ~ 41449340 (+)
G1983721 NA other downstream 817749 42063025 ~ 42103896 (+)
G1983777 NA other downstream 986964 42232240 ~ 42232904 (+)

Expression


Co-expression Network